RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 TRBV5-7A0A0A0MS05 114 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 TNFSF10P50591 281 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 C10orf111Q8N326 155 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 ZNF488Q96MN9 340 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 UBE2L6O14933 153 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
LDB3-205ENST00000429277 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 ADIPOR1Q96A54 375 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 TP53RKQ96S44 253 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 ELF5Q9UKW6 265 aaPredicted RBP11.03□□□□□ -0.64
LDB3-205ENST00000429277 HS3ST3B1Q9Y662 390 aa11.03□□□□□ -0.64
LDB3-205ENST00000429277 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 PMCHL1Q16048 86 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 OR52M1Q8NGK5 317 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 NRIP2Q9BQI9 281 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.64
LDB3-205ENST00000429277 SYNGR3O43761 229 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 UCP3P55916 312 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 AQP3Q92482 292 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.64
LDB3-205ENST00000429277 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.64
LDB3-205ENST00000429277 AUP1Q9Y679 476 aa11.02□□□□□ -0.64
LDB3-205ENST00000429277 DIRC3C9JPN6 131 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 HLA-DQB1P01920 261 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.65
LDB3-205ENST00000429277 IGLV3-21P80748 117 aaPredicted RBP11.02□□□□□ -0.65
LDB3-205ENST00000429277 RELQ04864 619 aaPredicted RBP11.02□□□□□ -0.65
LDB3-205ENST00000429277 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 DLL3Q9NYJ7 618 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 A0A1W2PPE3 182 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 PGLYRP1O75594 196 aaPredicted RBP11.02□□□□□ -0.65
LDB3-205ENST00000429277 PAPPA-AS1Q5QFB9 102 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 FAM53AQ6NSI3 398 aaPredicted RBP11.02□□□□□ -0.65
LDB3-205ENST00000429277 CD200R1LQ6Q8B3 271 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 LINC00470Q9BZP3 86 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 PDLIM4P50479 330 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 GFRA1P56159 465 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 IGSF11Q5DX21 431 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 NSUN5P2Q63ZY6 315 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 FADS6Q8N9I5 356 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 RAB37Q96AX2 223 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 RBKSQ9H477 322 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 HILPDAQ9Y5L2 63 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 QSER1Q2KHR3 1735 aa11.02□□□□□ -0.65
LDB3-205ENST00000429277 TMSB15BA0A087X1C1 80 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 FOXH1O75593 365 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 GCGP01275 180 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 SMIM10L1P0DMW3 83 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 SMIM10Q96HG1 83 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 B9A039 149 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 C8orf88P0DMB2 117 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 ZNF137PP52743 207 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 AQP10Q96PS8 301 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 QTRT1Q9BXR0 403 aaKnown RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 PPIAL4CA0A0B4J2A2 164 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 hCG_38984A0A1B0GV85 526 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 PPIAL4GP0DN37 164 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 C10orf128Q5T292 105 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 FGFRL1Q8N441 504 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 SCARF2Q96GP6 870 aaPredicted RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 SIRT4Q9Y6E7 314 aaPredicted RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 LIPFP07098 398 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 TRGC1P0CF51 173 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 SPINK2P20155 84 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 RPS11P62280 158 aaKnown RBP eCLIP11.01□□□□□ -0.65
LDB3-205ENST00000429277 COTL1Q14019 142 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 WDR25Q64LD2 544 aaPredicted RBP11.01□□□□□ -0.65
LDB3-205ENST00000429277 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 SLC25A45Q8N413 288 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 FAM216AQ8WUB2 273 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 FAM206AQ9NX38 181 aa11.01□□□□□ -0.65
LDB3-205ENST00000429277 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
LDB3-205ENST00000429277 KBTBD11O94819 623 aa11□□□□□ -0.65
LDB3-205ENST00000429277 COX6A1P12074 109 aa11□□□□□ -0.65
LDB3-205ENST00000429277 CKS2P33552 79 aa11□□□□□ -0.65
LDB3-205ENST00000429277 CLEC7AQ9BXN2 247 aa11□□□□□ -0.65
LDB3-205ENST00000429277 NKX2-8O15522 239 aa11□□□□□ -0.65
LDB3-205ENST00000429277 SCTP09683 121 aa11□□□□□ -0.65
LDB3-205ENST00000429277 VSIG10L2P0DP72 767 aa11□□□□□ -0.65
LDB3-205ENST00000429277 FCARP24071 287 aa11□□□□□ -0.65
LDB3-205ENST00000429277 GUCA2BQ16661 112 aa11□□□□□ -0.65
LDB3-205ENST00000429277 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
LDB3-205ENST00000429277 TBX15Q96SF7 602 aa11□□□□□ -0.65
LDB3-205ENST00000429277 MAP1LC3AQ9H492 121 aa11□□□□□ -0.65
LDB3-205ENST00000429277 CXorf65A6NEN9 183 aa11□□□□□ -0.65
LDB3-205ENST00000429277 ADIPOQQ15848 244 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms