RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 DUXBA0A1W2PPF3 345 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 FAM25EA8MYX2 175 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 H0YIZ8 118 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 DEGS1O15121 323 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 ADAP1O75689 374 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 RHBDL1O75783 438 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 PTBP3O95758 552 aaKnown RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 NMBP08949 121 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 HERV-K104P61576 105 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF154Q13106 437 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 PDCD1Q15116 288 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 BEAN1Q3B7T3 259 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 ABCA11PQ4W5N1 156 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 MOB1BQ7L9L4 216 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 C11orf53Q8IXP5 236 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 LGI3Q8N145 548 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 EIF4E3Q8N5X7 224 aaKnown RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 STOML3Q8TAV4 291 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 LRRC20Q8TCA0 184 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 MRPL30Q8TCC3 161 aaKnown RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 GLYATL2Q8WU03 294 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 ST8SIA2Q92186 375 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 DYRK2Q92630 601 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 RAB1CQ92928 201 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 OR10C1Q96KK4 312 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 CITED1Q99966 193 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 ARPC5LQ9BPX5 153 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 DNTTIP1Q9H147 329 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 GCM1Q9NP62 436 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 SLC2A9Q9NRM0 540 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM106BQ9NUM4 274 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 RASL12Q9NYN1 266 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 MBD2Q9UBB5 411 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 TMED3Q9Y3Q3 217 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 MMP24Q9Y5R2 645 aa7.13□□□□□ -1.27
HDAC1-202ENST00000428704 IGHV3-64DA0A0J9YX35 117 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 A0A1B0GUS0 222 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 F5H0A9 414 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-202ENST00000428704 G3V4G9 280 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-202ENST00000428704 J3QLI3 93 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 GPR31O00270 319 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 SH2D1BO14796 132 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TAAR5O14804 337 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 MPPED1O15442 326 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 SCTP09683 121 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TNFRSF1AP19438 455 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 AADACP22760 399 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TNFSF4P23510 183 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 GNRHRP30968 328 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 CFHR2P36980 270 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 LOXL3P58215 753 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 PAX5Q02548 391 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 HERPUD1Q15011 391 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 OR8G1Q15617 311 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 IGSF11Q5DX21 431 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 GGNBP1Q5YKI7 109 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 FIP1L1Q6UN15 594 aaKnown RBP7.12□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF497Q6ZNH5 498 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 KIR3DL3Q8N743 410 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 IL22RA2Q969J5 263 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 RAB39BQ96DA2 213 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM56Q96MV1 263 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 ADAT1Q9BUB4 502 aaKnown RBP7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TOLLIPQ9H0E2 274 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM165Q9HC07 324 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 PPP1R3CQ9UQK1 317 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM56-RWDD3S4R434 201 aa7.12□□□□□ -1.27
HDAC1-202ENST00000428704 IGKV1-6A0A0C4DH72 117 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 C3orf85A0A1B0GTC6 90 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 A0A1B0GW55 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 MPTX1A8MV57 137 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM178BH3BS89 294 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 IFNL4K9M1U5 179 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 SLC33A1O00400 549 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 CDIPTO14735 213 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 SHOXO15266 292 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 CDS2O95674 445 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 TSPAN15O95858 294 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 OR2H2O95918 312 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 CYB5R3P00387 301 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 RLN2P04090 185 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 HOXB5P09067 269 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 OR5AC1P0C628 307 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L2P0CJ85 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L3P0CJ86 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L4P0CJ87 422 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L5P0CJ88 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L6P0CJ89 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4L7P0CJ90 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 NUP62P37198 522 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 CD200P41217 278 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 EIF5AP63241 154 aaKnown RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 HLA-DRB3P79483 266 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 HOXA4Q00056 320 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 RAB32Q13637 225 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms