RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 OR2T10Q8NGZ9 312 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 SECTM1Q8WVN6 248 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 CFHR4Q92496 578 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 AKR1E2Q96JD6 320 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 NPFFR1Q9GZQ6 430 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
SGCE-204ENST00000428696 GHITMQ9H3K2 345 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
SGCE-204ENST00000428696 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
SGCE-204ENST00000428696 M0QYG6 137 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 CD1BP29016 333 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 LINC00205P59089 165 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 HERV-K104P61576 105 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 LIAT1Q6ZQX7 453 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
SGCE-204ENST00000428696 RBM14Q96PK6 669 aaKnown RBP11.66□□□□□ -0.54
SGCE-204ENST00000428696 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 SDHAF2Q9NX18 166 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
SGCE-204ENST00000428696 PEX14O75381 377 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 MOSP00540 346 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 IFNA6P05013 189 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 CT45A6P0DMU7 189 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 CT45A5P0DMU8 189 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 CT45A7P0DMV0 189 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 MDKP21741 143 aaPredicted RBP11.65□□□□□ -0.54
SGCE-204ENST00000428696 BLCAPP62952 87 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 RELBQ01201 579 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 FOXL1Q12952 345 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 LSAMPQ13449 338 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 ABCA11PQ4W5N1 156 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 TMEM17Q86X19 198 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 OR6F1Q8NGZ6 308 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 ZNF251Q9BRH9 671 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 PRSS22Q9GZN4 317 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 SLC5A7Q9GZV3 580 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 BEX1Q9HBH7 125 aa11.65□□□□□ -0.54
SGCE-204ENST00000428696 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 GABARAPH6UMI1 98 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 TPPPO94811 219 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 OR2F2O95006 317 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 PPYP01298 95 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 ACTBP60709 375 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 KRTAP21-3Q3LHN1 58 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 SPANXN2Q5MJ10 180 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 Q6ZSV7 163 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
SGCE-204ENST00000428696 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
SGCE-204ENST00000428696 TMEM89A2RUT3 159 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 A6NHS1 94 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 TNFSF12O43508 249 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 APOA2P02652 100 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 CD3DP04234 171 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 NAT1P18440 290 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 MC5RP33032 325 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 RPL15P61313 204 aaKnown RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 MRPS10P82664 201 aaKnown RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 DYRK1AQ13627 763 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 HABP2Q14520 560 aaPredicted RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 AWAT1Q58HT5 328 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 RNASE10Q5GAN6 216 aaKnown RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 OVCH2Q7RTZ1 564 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 RITA1Q96K30 269 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 TOLLIPQ9H0E2 274 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 CCL28Q9NRJ3 127 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 RABL2AQ9UBK7 228 aaPredicted RBP11.63□□□□□ -0.55
SGCE-204ENST00000428696 MTFP1Q9UDX5 166 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 RABL2BQ9UNT1 228 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 A3GALT2U3KPV4 340 aa11.63□□□□□ -0.55
SGCE-204ENST00000428696 PROP1O75360 226 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
SGCE-204ENST00000428696 CBX3Q13185 183 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 MMDQ15546 238 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 C16orf82Q7Z2V1 217 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 RNF114Q9Y508 228 aa11.62□□□□□ -0.55
SGCE-204ENST00000428696 H0YJW9 148 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 SLC22A5O76082 557 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 NDUFA7O95182 113 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 F2RL1P55085 397 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 PLGLAQ15195 96 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms