RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SLC25A45Q8N413 288 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 C17orf47Q8NEP4 570 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SFXN3Q9BWM7 321 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SH3BGRL3Q9H299 93 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 LTBP1Q14766 1721 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SCN3AQ9NY46 2000 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 IGHV1-45A0A0A0MS14 117 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 FOXL2P58012 376 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 C1QL3Q5VWW1 255 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 SEZ6L2Q6UXD5 910 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 RNF133Q8WVZ7 376 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 COL25A1Q9BXS0 654 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 PRO1933Q9H354 126 aa7.75□□□□□ -1.17
CTNND1-208ENST00000428599 MRPS18BQ9Y676 258 aaKnown RBP7.75□□□□□ -1.17
CTNND1-208ENST00000428599 CA2P00918 260 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OR10J1P30954 320 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 MPV17P39210 176 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 SNRPEP62304 92 aaKnown RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OR1K1Q8NGR3 316 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OR13C6PQ8NH95 151 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 ADAT3Q96EY9 351 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 POM121Q96HA1 1249 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 KCNK17Q96T54 332 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 RCC2Q9P258 522 aaKnown RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 HMSDA8MTL9 139 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 LMX1BO60663 402 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 HOXB1P14653 301 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 FCGR2BP31994 310 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 DLK1P80370 383 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 C2orf83Q53S99 150 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 HCP5Q6MZN7 132 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 ERASQ7Z444 233 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF418Q8TF45 676 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 FRRS1LQ9P0K9 344 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 CTDSPLO15194 276 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 NPPCP23582 126 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 INSL4Q14641 139 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 C9orf40Q8IXQ3 194 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 FAM216AQ8WUB2 273 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 MRPL24Q96A35 216 aaKnown RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 JMJD8Q96S16 334 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 SIRT7Q9NRC8 400 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 ELOVL5Q9NYP7 299 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 NUP214P35658 2090 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 CABIN1Q9Y6J0 2220 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 DMKNQ6E0U4 476 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OVCH2Q7RTZ1 564 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 TMEM52Q8NDY8 209 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 PRR13Q9NZ81 148 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 FLRT3Q9NZU0 649 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 OPN4Q9UHM6 478 aa7.74□□□□□ -1.17
CTNND1-208ENST00000428599 CDC42EP2O14613 210 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 LIPFP07098 398 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 SPNP16150 400 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF645Q8N7E2 425 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF383Q8NA42 475 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 SAP25Q8TEE9 199 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 MAP1LC3AQ9H492 121 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF430Q9H8G1 570 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-208ENST00000428599 FUT9Q9Y231 359 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 OGG1O15527 345 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 LINC00869P0C866 280 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 HOXA6P31267 233 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 TET1Q8NFU7 2136 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 YAE1D1Q9NRH1 226 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ARID2Q68CP9 1835 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 M0QZK8 103 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 GGCTO75223 188 aaKnown RBP7.73□□□□□ -1.17
CTNND1-208ENST00000428599 DNAL4O96015 105 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
CTNND1-208ENST00000428599 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF488Q96MN9 340 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 PRSS27Q9BQR3 290 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 UNC13CQ8NB66 2214 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ARF6P62330 175 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 DNM1P46Q6ZS02 220 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 OR8D4Q8NGM9 314 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF721Q8TF20 911 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 B9A039 149 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 PITX3O75364 302 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 HMGA2P52926 109 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 AWAT1Q58HT5 328 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF880Q6PDB4 577 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 DNASE2BQ8WZ79 361 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 ZNF385AQ96PM9 386 aaKnown RBP7.73□□□□□ -1.17
CTNND1-208ENST00000428599 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
CTNND1-208ENST00000428599 IGHV1-69-2A0A0G2JMI3 117 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 NTN1O95631 604 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 CRHP06850 196 aa7.72□□□□□ -1.17
CTNND1-208ENST00000428599 NAT2P11245 290 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms