RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR56B2PQ8NGI1 322 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 NABP1Q96AH0 204 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SLC39A9Q9NUM3 307 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 IGLV3-12A0A075B6K2 115 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-6A0A0C4DH72 117 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SLC22A20A6NK97 555 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 A6NNC1 897 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ZNF850A8MQ14 1090 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 C17orf105B2RV13 164 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 K7ERU9 68 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SERF1AO75920 110 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 BIDP55957 195 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 DCAF12Q5T6F0 453 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 KCNIP4Q6PIL6 250 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SUMF1Q8NBK3 374 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 OR4P4Q8NGL7 312 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 FAM71F1Q96KD3 344 aaPredicted RBP4.36□□□□□ -1.71
RIF1-203ENST00000428287 HSPB9Q9BQS6 159 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CFHR5Q9BXR6 569 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 MBNL3Q9NUK0 354 aaKnown RBP4.36□□□□□ -1.71
RIF1-203ENST00000428287 AQP7P3A6NL99 342 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 METTL12A8MUP2 240 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 C9JCJ5 164 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 M0R135 149 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SLC31A1O15431 190 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SCGB1D2O95969 90 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 CEACAM3P40198 252 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 PMCHL1Q16048 86 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ZNF776Q68DI1 518 aaPredicted RBP4.36□□□□□ -1.71
RIF1-203ENST00000428287 VASH2Q86V25 355 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 PATE1Q8WXA2 126 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 NAT6Q93015 286 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 SPSB4Q96A44 273 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ZNF799Q96GE5 643 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 ST3GAL6Q9Y274 331 aa4.36□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1D-13A0A0B4J2D9 117 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 G3V3Y1 287 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 ADAM20O43506 726 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 MPDU1O75352 247 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OR10J4P0C629 311 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-13P0DP09 117 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 WNT5AP41221 380 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 PPP1CAP62136 330 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 C19orf35Q6ZS72 473 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 CMTM2Q8TAZ6 248 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 RPUSD4Q96CM3 377 aaKnown RBP4.35□□□□□ -1.71
RIF1-203ENST00000428287 ALKBH7Q9BT30 221 aaPredicted RBP4.35□□□□□ -1.71
RIF1-203ENST00000428287 VSTM2BA6NLU5 285 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 DNPH1O43598 174 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OOSP2Q86WS3 158 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SCGB1C1Q8TD33 95 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 ACANP16112 2415 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 TMEM238C9JI98 176 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 NRASP01111 189 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 KRASP01116 189 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 BLKP51451 505 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 CLDN15P56746 228 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 ERVS71-1P61550 626 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 HERV-K104P61576 105 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 RTP5Q14D33 572 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 PLPPR5Q32ZL2 321 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 PRSS58Q8IYP2 241 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SAXO1Q8IYX7 474 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 TCTEX1D1Q8N7M0 179 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 CST9LQ9H4G1 147 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SLC35D1Q9NTN3 355 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 RYDENQ9NUL5 291 aaKnown RBP4.35□□□□□ -1.71
RIF1-203ENST00000428287 ZNF586Q9NXT0 402 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 S1PR2O95136 353 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 VAMP5O95183 116 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OR5G3P0C626 314 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SELENOVP59797 346 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 RNFT1Q5M7Z0 435 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OR2M7Q8NG81 312 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OR2M3Q8NG83 312 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 STARD4Q96DR4 205 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SFRP2Q96HF1 295 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 NPIPA5E9PKD4 350 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 TCF21O43680 179 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-5P01602 117 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 HLA-DRB1P01911 266 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 VIPR2P41587 438 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 DEFB103AP81534 67 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 ZNF585BQ52M93 769 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OSR2Q8N2R0 312 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 VN1R17PQ8TDU5 208 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 CORO2AQ92828 525 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 UHRF2Q96PU4 802 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 TMEM9BQ9NQ34 198 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 NPIPA1Q9UND3 350 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
RIF1-203ENST00000428287 A0A1W2PQF6 199 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms