RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 TMBIM6P55061 237 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ARPP19P56211 112 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 TAS2R60P59551 318 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RHOAP61586 193 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RPL31P62899 125 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RPL38P63173 70 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 HPCAP84074 193 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ATP5G2Q06055 141 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 BIKQ13323 160 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PMS2P3Q13401 168 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 MOGQ16653 247 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 DEFB115Q30KQ5 88 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 NDUFAF6Q330K2 333 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SP6Q3SY56 376 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PYCR3Q53H96 274 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 HENMT1Q5T8I9 393 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PTRHD1Q6GMV3 140 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 XAF1Q6GPH4 301 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C22orf39Q6P5X5 142 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 TTC33Q6PID6 262 aaPredicted RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF773Q6PK81 442 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 FAM151BQ6UXP7 276 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 TMEM136Q6ZRR5 245 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C8orf59Q8N0T1 100 aaPredicted RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ZCCHC24Q8N2G6 241 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 NATD1Q8N6N6 113 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 DRAXINQ8NBI3 349 aaPredicted RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SLC26A10Q8NG04 563 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 OR51A7Q8NH64 312 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ZFAND1Q8TCF1 268 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RAB2BQ8WUD1 216 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ORAOV1Q8WV07 137 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CYGBQ8WWM9 190 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 RBPMSQ93062 196 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 TMBIM1Q969X1 311 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 TMIGD2Q96BF3 282 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PPWD1Q96BP3 646 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C12orf43Q96C57 262 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 ISOC1Q96CN7 298 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 OTUB2Q96DC9 234 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PYURFQ96I23 114 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 DERL3Q96Q80 235 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 OR52E6Q96RD3 313 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PITX2Q99697 317 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PDCD1LG2Q9BQ51 273 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SHANK2-AS3Q9BTD1 123 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CHID1Q9BWS9 393 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 DPY30Q9C005 99 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 DUSP21Q9H596 190 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CXorf21Q9HAI6 301 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 PARVBQ9HBI1 364 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 LRTM1Q9HBL6 345 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 OR2S2Q9NQN1 319 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CA10Q9NS85 328 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 VAPAQ9P0L0 249 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 C3orf18Q9UK00 162 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 CFL2Q9Y281 166 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 BTRCQ9Y297 605 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 POLR3HQ9Y535 204 aaPredicted RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SLC22A7Q9Y694 548 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 KIAA0100Q14667 2235 aaKnown RBP1.27□□□□□ -2.21
PTPRC-208ENST00000427110 MPDZO75970 2070 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 SCN3AQ9NY46 2000 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 THADAQ6YHU6 1953 aa1.27□□□□□ -2.21
PTPRC-208ENST00000427110 NUP210LQ5VU65 1888 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 COL5A1P20908 1838 aaPredicted RBP1.26□□□□□ -2.21
PTPRC-208ENST00000427110 CABIN1Q9Y6J0 2220 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 DSPPQ9NZW4 1301 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 MYO9BQ13459 2157 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 TRAV8-7A0A075B6U6 113 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 IGKV2-24A0A0C4DH68 120 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 LOC100130705A0A1B0GUX0 176 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 A0A1B0GVG6 124 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 TMEM72A0PK05 275 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 ARRDC5A6NEK1 342 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 CCDC160A6NGH7 325 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 CLDN24A6NM45 220 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 C5orf67F2Z3F1 127 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 K7ERQ8 282 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 RFXANKO14593 260 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 GNGT2O14610 69 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 SLC22A1O15245 554 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 RGS5O15539 181 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 TPST1O60507 370 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 TRAPPC6AO75865 159 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 SULT1C4O75897 302 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 DHRS3O75911 302 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 MYO1DO94832 1006 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 CXorf1O96002 111 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 SOD1P00441 154 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 SERPINA1P01009 418 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 IGKV1-39P01597 117 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 IGHV1-46P01743 117 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 IGKV1D-39P04432 117 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 OR5AL1P0C617 328 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 PTNP21246 168 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 PAX6P26367 422 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 HLA-DMAP28067 261 aa1.26□□□□□ -2.21
PTPRC-208ENST00000427110 TEAD1P28347 426 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms