RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RP1P56715 2156 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 ZNF385CQ66K41 422 aaPredicted RBP11.82□□□□□ -0.52
RPL28-202ENST00000426763 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 TICRRQ7Z2Z1 1910 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 SPTBN2O15020 2390 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 MMP9P14780 707 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 LOXL3P58215 753 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 PSG5Q15238 335 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 TMEM241Q24JQ0 296 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 PLAC9Q5JTB6 97 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 RSRP1Q9BUV0 290 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 SSBP3Q9BWW4 388 aaPredicted RBP11.82□□□□□ -0.52
RPL28-202ENST00000426763 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
RPL28-202ENST00000426763 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
RPL28-202ENST00000426763 CLPSP04118 112 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 PF4V1P10720 104 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 GGNQ86UU5 652 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 ASPHD2Q6ICH7 369 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 UNQ5815/PRO19632Q6UWF5 114 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.81□□□□□ -0.52
RPL28-202ENST00000426763 VSIG10L2P0DP72 767 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 SLC35B3Q9H1N7 401 aa11.81□□□□□ -0.52
RPL28-202ENST00000426763 C7orf66A4D0T2 115 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 TSTD3H0UI37 97 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 MFNGO00587 321 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 SLC25A17O43808 307 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
RPL28-202ENST00000426763 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 CBLN4Q9NTU7 201 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 TM4SF5O14894 197 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 SMAD7O15105 426 aaKnown RBP11.8□□□□□ -0.52
RPL28-202ENST00000426763 RHBDL1O75783 438 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 C1QTNF12Q5T7M4 302 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 DNAJC13O75165 2243 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
RPL28-202ENST00000426763 SSTR5P35346 364 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 NPAS1Q99742 590 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 KHDC3LQ587J8 217 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 RGP1Q92546 391 aaPredicted RBP11.8□□□□□ -0.52
RPL28-202ENST00000426763 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 CD1BP29016 333 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 TM2D1Q9BX74 207 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 TMEM140Q9NV12 185 aa11.8□□□□□ -0.52
RPL28-202ENST00000426763 IGKV3-7A0A075B6H7 116 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 EFNA2O43921 213 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 PITX3O75364 302 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 OR2A4O95047 310 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 COMPP49747 757 aaPredicted RBP11.79□□□□□ -0.52
RPL28-202ENST00000426763 PEAR1Q5VY43 1037 aaPredicted RBP11.79□□□□□ -0.52
RPL28-202ENST00000426763 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 ZDHHC11Q9H8X9 412 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 HIGD1AQ9Y241 93 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 GATCO43716 136 aaKnown RBP11.79□□□□□ -0.52
RPL28-202ENST00000426763 ID1P41134 155 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 FAM222BQ8WU58 562 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 TLNRD1Q9H1K6 362 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 CEACAM18A8MTB9 384 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 MST1P26927 711 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 LY6EQ16553 131 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 TMEM8BA6NDV4 472 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 C1QL2Q7Z5L3 287 aa11.79□□□□□ -0.52
RPL28-202ENST00000426763 H0YL77 283 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 GALR1P47211 349 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 UCP3P55916 312 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 BATFQ16520 125 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 DNM1P46Q6ZS02 220 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 GLRX5Q86SX6 157 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 LCN2P80188 198 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 FOXF2Q12947 444 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 GAMTQ14353 236 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 FAM216BQ8N7L0 139 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 ZIC4Q8N9L1 334 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 ELF5Q9UKW6 265 aaPredicted RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 HYPMO75409 117 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 FAM201AQ5SY85 155 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 Q6ZS92 163 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 WBP1Q96G27 269 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 HCP5Q6MZN7 132 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms