RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 GRNP28799 593 aaKnown RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 ERVK-16P61578 105 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RPL31P62899 125 aaKnown RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 TAGLNQ01995 201 aaKnown RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 ID3Q02535 119 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 TFF3Q07654 80 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 BAXQ07812 192 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 FAM201AQ5SY85 155 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 ALKAL2Q6UX46 152 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 SPAG16Q8N0X2 631 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 FAM216BQ8N7L0 139 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 ITLN2Q8WWU7 325 aaPredicted RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 NEUROG1Q92886 237 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RAB1CQ92928 201 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 S1PR3Q99500 378 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 AIFM2Q9BRQ8 373 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 ABHD14AQ9BUJ0 271 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 MED9Q9NWA0 146 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RNF150Q9ULK6 438 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 RCL1Q9Y2P8 373 aaKnown RBP7.84□□□□□ -1.15
HMGB4-201ENST00000425537 PLCE1Q9P212 2302 aa7.84□□□□□ -1.15
HMGB4-201ENST00000425537 IGHV3-43A0A0B4J1X8 118 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 C19orf84I3L1E1 186 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 PLAUP00749 431 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 IGLV2-14P01704 120 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 IGHV3-43DP0DP04 118 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 THBS3P49746 956 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 LOXL3P58215 753 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 TAS2R30P59541 319 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF266Q14584 549 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 LTC4SQ16873 150 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 GPR146Q96CH1 333 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF714Q96N38 554 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 AGMATQ9BSE5 352 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 DCTN5Q9BTE1 182 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 PARP12Q9H0J9 701 aaKnown RBP7.83□□□□□ -1.16
HMGB4-201ENST00000425537 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.83□□□□□ -1.16
HMGB4-201ENST00000425537 SDHAF2Q9NX18 166 aa7.83□□□□□ -1.16
HMGB4-201ENST00000425537 RPUSD1Q9UJJ7 312 aaKnown RBP7.83□□□□□ -1.16
HMGB4-201ENST00000425537 GCN1Q92616 2671 aaKnown RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 hCG_1809904A0A1W2PP81 198 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 A0A1W2PPE2 198 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 A0A1W2PR64 198 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 A0A1W2PRV1 198 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 M0R1X1 148 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 TOR1AO14656 332 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 PITX3O75364 302 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 HPRT1P00492 218 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 EPHA1P21709 976 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 NFYBP25208 207 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 LOXP28300 417 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 CAV2P51636 162 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 TMEM33P57088 247 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 HOXA4Q00056 320 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 EIF4EBP1Q13541 118 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 C17orf58Q2M2W7 97 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF585BQ52M93 769 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 HEPN1Q6WQI6 88 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 H2BFWTQ7Z2G1 175 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 STX12Q86Y82 276 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 ZCCHC24Q8N2G6 241 aaKnown RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 FGFRL1Q8N441 504 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 C8orf31Q8N9H6 132 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 UBAC2Q8NBM4 344 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 RNF141Q8WVD5 230 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 H1FXQ92522 213 aaKnown RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 CIB3Q96Q77 187 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 PCNX1Q96RV3 2341 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 CLCC1Q96S66 551 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 LYRM2Q9NU23 88 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 CACNG5Q9UF02 275 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 MIOXQ9UGB7 285 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 WSB1Q9Y6I7 421 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 KIAA2026Q5HYC2 2103 aa7.82□□□□□ -1.16
HMGB4-201ENST00000425537 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
HMGB4-201ENST00000425537 RPS10-NUDT3A0A1W2PQS6 291 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 MSGN1A6NI15 193 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DVL1O14640 695 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 TNFRSF13BO14836 293 aaPredicted RBP7.81□□□□□ -1.16
HMGB4-201ENST00000425537 SYNGR2O43760 224 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 SSSCA1O60232 199 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DFFBO76075 338 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 RRASP10301 218 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 SELLP14151 372 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 IL3RAP26951 378 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DUTP33316 252 aaKnown RBP7.81□□□□□ -1.16
HMGB4-201ENST00000425537 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 MIDNQ504T8 468 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DHRS7BQ6IAN0 325 aaPredicted RBP7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 COMMD7Q86VX2 200 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 DMBX1Q8NFW5 382 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 OR8B3Q8NGG8 313 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 SAT2Q96F10 170 aaPredicted RBP7.81□□□□□ -1.16
HMGB4-201ENST00000425537 OR8B2Q96RD0 313 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms