RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.53
ACTN4-203ENST00000424234 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
ACTN4-203ENST00000424234 ITPR3Q14573 2671 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 MAP1AP78559 2803 aaPredicted RBP11.71□□□□□ -0.54
ACTN4-203ENST00000424234 TMEM178BH3BS89 294 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 IFNL4K9M1U5 179 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.54
ACTN4-203ENST00000424234 SH2D1BO14796 132 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 WNT9BO14905 357 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 FBXO24O75426 580 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 PGLYRP1O75594 196 aaPredicted RBP11.71□□□□□ -0.54
ACTN4-203ENST00000424234 LHBP01229 141 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 VDAC1P21796 283 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 LPAR6P43657 344 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 CAV2P51636 162 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 F2RL1P55085 397 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 ZNF146Q15072 292 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 FAM201AQ5SY85 155 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 ATRAIDQ6UW56 229 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 SVBPQ8N300 66 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.54
ACTN4-203ENST00000424234 HRH4Q9H3N8 390 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 HES4Q9HCC6 221 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 TREM1Q9NP99 234 aa11.71□□□□□ -0.54
ACTN4-203ENST00000424234 CARHSP1Q9Y2V2 147 aaKnown RBP11.71□□□□□ -0.54
ACTN4-203ENST00000424234 CREBBPQ92793 2442 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 LRRC30A6NM36 301 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 TSPAN4O14817 238 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 NXPH2O95156 264 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 OR2H2O95918 312 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 IRF2P14316 349 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 CD80P33681 288 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 NMSQ5H8A3 153 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 MALRD1Q5VYJ5 2156 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 OR10V1Q8NGI7 309 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
ACTN4-203ENST00000424234 F8W036 122 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SIRPB1O00241 398 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 ADAM20O43506 726 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SPP1P10451 314 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SLC25A6P12236 298 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 F2RP25116 425 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 RAB5CP51148 216 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 EWSR1Q01844 656 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■■□ 22.2
ACTN4-203ENST00000424234 Q6ZRG5 221 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 LRRC75A-AS1Q8N1F1 130 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 COMMD1Q8N668 190 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 BSCL2Q96G97 398 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-203ENST00000424234 AKR1E2Q96JD6 320 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SEC11CQ9BY50 192 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 TRAPPC2LQ9UL33 140 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 STRAPQ9Y3F4 350 aaKnown RBP11.69□□□□□ -0.54
ACTN4-203ENST00000424234 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
ACTN4-203ENST00000424234 SIGLEC5O15389 551 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 AKR1C2P52895 323 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 VAMP2P63027 116 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 HMGN3Q15651 99 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 SMIM21Q3B7S5 101 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 PLPPR1Q8TBJ4 325 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 MBNL3Q9NUK0 354 aaKnown RBP11.68□□□□□ -0.54
ACTN4-203ENST00000424234 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
ACTN4-203ENST00000424234 IGHV3OR15-7A0A075B7D8 119 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 PITX3O75364 302 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 ADCYAP1P18509 176 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 PDLIM4P50479 330 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 POLR2GP62487 172 aaKnown RBP eCLIP11.67□□□□□ -0.54
ACTN4-203ENST00000424234 ID3Q02535 119 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 NHLH2Q02577 135 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 ZNF266Q14584 549 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 TEX36Q5VZQ5 186 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 CLEC9AQ6UXN8 241 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-203ENST00000424234 HAND1O96004 215 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 MUC1P15941 1255 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-203ENST00000424234 ATF4P18848 351 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-203ENST00000424234 SRSF3P84103 164 aaKnown RBP11.67□□□□□ -0.54
ACTN4-203ENST00000424234 BAXQ07812 192 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 AVPI1Q5T686 147 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 FAM90A1Q86YD7 464 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 KRTAP1-3Q8IUG1 177 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 IL1F10Q8WWZ1 152 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 OR1A1Q9P1Q5 309 aa11.67□□□□□ -0.54
ACTN4-203ENST00000424234 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
ACTN4-203ENST00000424234 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
ACTN4-203ENST00000424234 A0A1B0GU03 582 aa11.66□□□□□ -0.54
ACTN4-203ENST00000424234 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
ACTN4-203ENST00000424234 IGSF23A1L1A6 192 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms