RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 KRASP01116 189 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 CCKARP32238 428 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 G6PCP35575 357 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 PPT1P50897 306 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 UBE2KP61086 200 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 RUNX1Q01196 453 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 ZNF816Q0VGE8 651 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-202ENST00000422785 OR2B11Q5JQS5 317 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
CDCA3-202ENST00000422785 Q8NA96 180 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 ELOVL5Q9NYP7 299 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 HSPB7Q9UBY9 170 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 Q9UFV3 132 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 MEX3AA1L020 520 aaKnown RBP11.48□□□□□ -0.57
CDCA3-202ENST00000422785 ST8SIA5O15466 376 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 S1PR2O95136 353 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 FAM222BQ8WU58 562 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 ABHD14AQ9BUJ0 271 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 IL19Q9UHD0 177 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 JPT1Q9UK76 154 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 LAMP3Q9UQV4 416 aa11.48□□□□□ -0.57
CDCA3-202ENST00000422785 RP1L1Q8IWN7 2480 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-202ENST00000422785 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 CLDN14O95500 239 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 HBG1P69891 147 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 HBG2P69892 147 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 FOXC1Q12948 553 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 DPPA3Q6W0C5 159 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 ZNRF1Q8ND25 227 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-202ENST00000422785 USF3Q68DE3 2245 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 Q3ZCU0 254 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 MORN2Q502X0 79 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 AKR1C8PQ5T2L2 129 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 RBKSQ9H477 322 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
CDCA3-202ENST00000422785 LRRC30A6NM36 301 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 LINC00473A8K010 186 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 C16orf97H3BN30 126 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 F2RL2O00254 374 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 YPEL1O60688 119 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 H2AFB1P0C5Y9 115 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 TNFAIP6P98066 277 aaPredicted RBP11.46□□□□□ -0.57
CDCA3-202ENST00000422785 ARL16Q0P5N6 197 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 SLC25A24Q6NUK1 477 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 YPEL2Q96QA6 119 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 GNG12Q9UBI6 72 aa11.46□□□□□ -0.57
CDCA3-202ENST00000422785 APC2O95996 2303 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 PTPRZ1P23471 2315 aaPredicted RBP11.46□□□□□ -0.58
CDCA3-202ENST00000422785 RAB29O14966 203 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 GPR12P47775 334 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 TBR1Q16650 682 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 LTC4SQ16873 150 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 SPANXN5Q5MJ07 72 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 SP5Q6BEB4 398 aaPredicted RBP11.46□□□□□ -0.58
CDCA3-202ENST00000422785 TMEM108Q6UXF1 575 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 GFRALQ6UXV0 394 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 ZNF561Q8N587 486 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 CD300LFQ8TDQ1 290 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 C14orf79Q96F83 325 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 OR6C3Q9NZP0 311 aa11.46□□□□□ -0.58
CDCA3-202ENST00000422785 GPR37O15354 613 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 TNFSF4P23510 183 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 ZNF835Q9Y2P0 537 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 FBXO7Q9Y3I1 522 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 A0A1B0GV50 99 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 OR8U8P0C7N1 319 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 PTAFRP25105 342 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 EDDM3BP56851 147 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 LOXL3P58215 753 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 CCL20P78556 96 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 TLE4Q04727 773 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 TMEM14EPQ6UXP3 125 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 Q8TCH9 128 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 SDSLQ96GA7 329 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 SCNM1Q9BWG6 230 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 PARD6GQ9BYG4 376 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-202ENST00000422785 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 ACACAQ13085 2346 aa11.45□□□□□ -0.58
CDCA3-202ENST00000422785 MAP1BP46821 2468 aaKnown RBP11.45□□□□□ -0.58
CDCA3-202ENST00000422785 CGB3P0DN86 165 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms