RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 TLE4Q04727 773 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 CCDC71LQ8N9Z2 235 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 OR10AD1Q8NGE0 317 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 FAM210BQ96KR6 192 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 MRPL37Q9BZE1 423 aaKnown RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 SVEP1Q4LDE5 3571 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 TRBV24-1A0A075B6N3 115 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 DIRAS3O95661 229 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 ATP6V0CP27449 155 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 LOXP28300 417 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 GLRXP35754 106 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 HLA-DRB3P79483 266 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 NHLH2Q02577 135 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 ICAM4Q14773 271 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 JOSD1Q15040 202 aaPredicted RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 CLEC9AQ6UXN8 241 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 Q6ZSR3 168 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 SSX8Q7RTT4 187 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 PIGCQ92535 297 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 MSI2Q96DH6 328 aaKnown RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 GPR173Q9NS66 373 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
LINC00642-201ENST00000419459 RNF115Q9Y4L5 304 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 HECTD1Q9ULT8 2610 aa10.84□□□□□ -0.67
LINC00642-201ENST00000419459 TGIF2-C20orf24A0A0A6YYL0 155 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 E7EQL1 145 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 J3QW42 95 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 MMP9P14780 707 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 FABP4P15090 132 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 SELEP16581 610 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 CA6P23280 308 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 GCH1P30793 250 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 ZNF343Q6P1L6 599 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 LYZL2Q7Z4W2 148 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 SPIN2AQ99865 258 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 SPIN2BQ9BPZ2 258 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 ACTR3CQ9C0K3 210 aaPredicted RBP10.83□□□□□ -0.68
LINC00642-201ENST00000419459 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 PLEKHJ1Q9NW61 149 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 ZNF391Q9UJN7 358 aa10.83□□□□□ -0.68
LINC00642-201ENST00000419459 IGKV1D-8A0A087WSZ0 117 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CLEC18AA5D8T8 446 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 H0YL77 283 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CLDN34H7C241 214 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 TIMM8AO60220 97 aaPredicted RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OR4A8P0C604 315 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 TMEM225BP0DP42 221 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 RAC2P15153 192 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 NDUFB7P17568 137 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 BAXQ07812 192 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 ADIPOQQ15848 244 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 TAF9Q16594 264 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 ZNF718Q3SXZ3 478 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 FAM185AQ8N0U4 392 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 ZCCHC24Q8N2G6 241 aaKnown RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CYB561D1Q8N8Q1 229 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CLEC18CQ8NCF0 446 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 PIGTQ969N2 578 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 Q96M66 194 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 NEU1Q99519 415 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 SLC2A9Q9NRM0 540 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 USF3Q68DE3 2245 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 A8MWP6 167 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CYB5R3P00387 301 aaPredicted RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OPN1MWP04001 364 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OPN1MW2P0DN77 364 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OPN1MW3P0DN78 364 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 IL2RGP31785 369 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 KLF3P57682 345 aaPredicted RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CCL20P78556 96 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 HNF4GQ14541 408 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 MBNL2Q5VZF2 373 aaKnown RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 TMEM183AQ8IXX5 376 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 OR5D18Q8NGL1 313 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CLDND2Q8NHS1 167 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 FRZBQ92765 325 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 NDUFAF3Q9BU61 184 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CTDSP1Q9GZU7 261 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 CISD1Q9NZ45 108 aaKnown RBP10.82□□□□□ -0.68
LINC00642-201ENST00000419459 APCP25054 2843 aa10.82□□□□□ -0.68
LINC00642-201ENST00000419459 ZNF816-ZNF321PA0A0X1KG74 233 aa10.81□□□□□ -0.68
LINC00642-201ENST00000419459 NRASP01111 189 aa10.81□□□□□ -0.68
LINC00642-201ENST00000419459 PRDX4Q13162 271 aa10.81□□□□□ -0.68
LINC00642-201ENST00000419459 HAGHQ16775 308 aa10.81□□□□□ -0.68
LINC00642-201ENST00000419459 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
LINC00642-201ENST00000419459 PLCXD3Q63HM9 321 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms