RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C6orf62Q9GZU0 229 aaPredicted RBP18.44■□□□□ 0.54
SMARCB1-205ENST00000417137 OR2D2Q9H210 308 aa18.44■□□□□ 0.54
SMARCB1-205ENST00000417137 ZNF736B4DX44 427 aaPredicted RBP18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 FGF16O43320 207 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 SLC22A5O76082 557 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 CT45A6P0DMU7 189 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 CT45A5P0DMU8 189 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 CT45A7P0DMV0 189 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 NFYAP23511 347 aaPredicted RBP18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 BLCAPP62952 87 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 Q8N2B8 174 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 MCFD2Q8NI22 146 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 GPX8Q8TED1 209 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 ZNF747Q9BV97 191 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 MIXL1Q9H2W2 232 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 ZNF702PQ9H963 129 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 RABL2AQ9UBK7 228 aaPredicted RBP18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 RABL2BQ9UNT1 228 aa18.43■□□□□ 0.54
SMARCB1-205ENST00000417137 OR5H14A6NHG9 310 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 NCBP2LA6PVI3 153 aaKnown RBP18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 FCER2P06734 321 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 OR5H8P0DN80 308 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 NAT1P18440 290 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 TAS2R46P59540 309 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 CDK10Q15131 360 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 FBLN7Q53RD9 439 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 LAX1Q8IWV1 398 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 SNAPC3Q92966 411 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 ANAPC10Q9UM13 185 aa18.42■□□□□ 0.54
SMARCB1-205ENST00000417137 M0R1X1 148 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 HAX1O00165 279 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 ABCA11PQ4W5N1 156 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 Q8N6K4 173 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 DGCR14Q96DF8 476 aaKnown RBP18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 DIRAS2Q96HU8 199 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 SDHAF2Q9NX18 166 aa18.41■□□□□ 0.54
SMARCB1-205ENST00000417137 PROP1O75360 226 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 FCGR2CP31995 323 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 PROK1P58294 105 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 SHISA2Q6UWI4 295 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 OR5AN1Q8NGI8 311 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 OR5H2Q8NGV7 314 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 NXF2Q9GZY0 626 aaKnown RBP18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 SIGLEC9Q9Y336 463 aa18.4■□□□□ 0.54
SMARCB1-205ENST00000417137 H7C2Y5 167 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 J3QRK9 145 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 PEX14O75381 377 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 TUSC2O75896 110 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 APOA2P02652 100 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 RCVRNP35243 200 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 TAGLNQ01995 201 aaKnown RBP18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 FAM131AQ6UXB0 335 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 ZNF645Q8N7E2 425 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 C5orf56Q8N8D9 126 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 DRAXINQ8NBI3 349 aaPredicted RBP18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 GIMAP1Q8WWP7 306 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 FCAMRQ8WWV6 532 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 DCUN1D5Q9BTE7 237 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 MMP27Q9H306 513 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 WASHC3Q9Y3C0 194 aa18.39■□□□□ 0.53
SMARCB1-205ENST00000417137 H0YJW9 148 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 RBBP9O75884 186 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 AMY1AP04745 511 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 AMY2AP04746 511 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 VDAC2P45880 294 aaPredicted RBP18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 MRPS10P82664 201 aaKnown RBP18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 C9orf152Q5JTZ5 239 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 GLDNQ6ZMI3 551 aaPredicted RBP18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 OVCH2Q7RTZ1 564 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 ADTRPQ96IZ2 230 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 ABHD1Q96SE0 405 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 RNF5Q99942 180 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 RASL11BQ9BPW5 248 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 EHFQ9NZC4 300 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 A3GALT2U3KPV4 340 aa18.38■□□□□ 0.53
SMARCB1-205ENST00000417137 PMP2P02689 132 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 THBS3P49746 956 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 ACTBP60709 375 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 MMDQ15546 238 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 PYHIN1Q6K0P9 492 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 DHRS11Q6UWP2 260 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 LYSMD2Q8IV50 215 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 WFDC12Q8WWY7 111 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 PLSCR3Q9NRY6 295 aa18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 LIN7CQ9NUP9 197 aaKnown RBP18.37■□□□□ 0.53
SMARCB1-205ENST00000417137 PPYP01298 95 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 AADACP22760 399 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 HLA-DMAP28067 261 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 S100A5P33763 92 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 RFX2P48378 723 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 F2RL1P55085 397 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 CBX3Q13185 183 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 DYRK1AQ13627 763 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 IL18Q14116 193 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 Q6ZS46 218 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 PDPNQ86YL7 162 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 Q8N9W7 124 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 ZNF383Q8NA42 475 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 SERTAD4Q9NUC0 356 aa18.36■□□□□ 0.53
SMARCB1-205ENST00000417137 KIAA1456Q9P272 454 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms