RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ABHD14BQ96IU4 210 aa11.14□□□□□ -0.63
SCN1B-202ENST00000415950 GAL3ST2Q9H3Q3 398 aa11.14□□□□□ -0.63
SCN1B-202ENST00000415950 AKIRIN1Q9H9L7 192 aaPredicted RBP11.14□□□□□ -0.63
SCN1B-202ENST00000415950 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 NPIPB9F8W1W9 429 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 UQCRFS1P47985 274 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 PLPPR5Q32ZL2 321 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 PTPRDP23468 1912 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 CORTO00230 105 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 SOD3P08294 240 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 HOXA6P31267 233 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 SOX8P57073 446 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 FAM216AQ8WUB2 273 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 J3QT63 122 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 ISG15P05161 165 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 CD99P14209 185 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 MPLP40238 635 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 OR2M3Q8NG83 312 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
SCN1B-202ENST00000415950 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
SCN1B-202ENST00000415950 SCN5AQ14524 2016 aa11.13□□□□□ -0.63
SCN1B-202ENST00000415950 A0A1B0GU03 582 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 NDUFS6O75380 124 aaKnown RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 DANCRP0C864 163 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 HARBI1Q96MB7 349 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 OR2J1Q9GZK6 312 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 MYOZ1Q9NP98 299 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 APCSP02743 223 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 H1FOOQ8IZA3 346 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF319Q9P2F9 582 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 RLFQ13129 1914 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 IGKV1D-8A0A087WSZ0 117 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 M0QZK8 103 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 SMPD2O60906 423 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF735P0CB33 412 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 FCARP24071 287 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 EPHA8P29322 1005 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 OR2Y1Q8NGV0 311 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 SLC25A40Q8TBP6 338 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF837Q96EG3 531 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ANGPTL4Q9BY76 406 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 TMEM38BQ9NVV0 291 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 CARHSP1Q9Y2V2 147 aaKnown RBP11.12□□□□□ -0.63
SCN1B-202ENST00000415950 A0A0G2JMZ2 1700 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 K7ESF4 209 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 GNG7O60262 68 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 NMUP48645 174 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 COL5A1-AS1Q5SY13 56 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
SCN1B-202ENST00000415950 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 SIAH2O43255 324 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 CCL20P78556 96 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 PSG4Q00888 419 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RTP5Q14D33 572 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 TEPPQ6URK8 271 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
SCN1B-202ENST00000415950 ZDHHC8Q9ULC8 765 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 SCN8AQ9UQD0 1980 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RPL36A-HNRNPH2H7BZ11 118 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 M0QZ24 198 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 C5orf24Q7Z6I8 188 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RAB24Q969Q5 203 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 PCED1AQ9H1Q7 454 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 SPG11Q96JI7 2443 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 J3QR06 171 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 PDE6DO43924 150 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 GZMHP20718 246 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 BRS3P32247 399 aa11.11□□□□□ -0.63
SCN1B-202ENST00000415950 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
SCN1B-202ENST00000415950 EIF4E3Q8N5X7 224 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms