RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 DTYMKP23919 212 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 PRRX1P54821 245 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 AESQ08117 197 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 SCGB2B2Q4G0G5 96 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 ZNF565Q8N9K5 539 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 OR5H2Q8NGV7 314 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 CMSS1Q9BQ75 279 aaKnown RBP16.46■□□□□ 0.23
PTPRU-203ENST00000415600 ST6GALNAC5Q9BVH7 336 aa16.46■□□□□ 0.23
PTPRU-203ENST00000415600 OR7C1O76099 320 aaPredicted RBP16.45■□□□□ 0.22
PTPRU-203ENST00000415600 OPN1MWP04001 364 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 OPN1MW2P0DN77 364 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 OPN1MW3P0DN78 364 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 MRPS15P82914 257 aaKnown RBP16.45■□□□□ 0.22
PTPRU-203ENST00000415600 IL13RA2Q14627 380 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 CCDC144NLQ6NUI1 221 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
PTPRU-203ENST00000415600 SEC22CQ9BRL7 303 aa16.45■□□□□ 0.22
PTPRU-203ENST00000415600 RCC2Q9P258 522 aaKnown RBP16.45■□□□□ 0.22
PTPRU-203ENST00000415600 SULT1A3P0DMM9 295 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 SULT1A4P0DMN0 295 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 VDAC2P45880 294 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-203ENST00000415600 PRAMEF5Q5TYX0 476 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 OR4P4Q8NGL7 312 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 CCDC107Q8WV48 283 aa16.44■□□□□ 0.22
PTPRU-203ENST00000415600 HDHD3Q9BSH5 251 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-203ENST00000415600 ZNF230Q9UIE0 474 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-203ENST00000415600 ZNF729A6NN14 1252 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-203ENST00000415600 SLC33A1O00400 549 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-203ENST00000415600 SSNA1O43805 119 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 CREBL2O60519 120 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-203ENST00000415600 GLIPR1P48060 266 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 OR4F17Q8NGA8 305 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 OR5AP2Q8NGF4 316 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 MRGPRFQ96AM1 343 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 OR4F4Q96R69 305 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 SERTAD4Q9NUC0 356 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 CMYA5Q8N3K9 4069 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 FCGR3AP08637 254 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 CD34P28906 385 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 OR3A3P47888 321 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 KCNJ3P48549 501 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 ZFP69Q49AA0 526 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 PAN3Q58A45 887 aaKnown RBP16.43■□□□□ 0.22
PTPRU-203ENST00000415600 LDLRAD2Q5SZI1 272 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 Q6P435 159 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 NDUFA11Q86Y39 141 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 MAFIPQ8WZ33 124 aa16.43■□□□□ 0.22
PTPRU-203ENST00000415600 AMMECR1Q9Y4X0 333 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-203ENST00000415600 OOSP1A8MZH6 123 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 ATXN7L3Q14CW9 347 aaPredicted RBP16.42■□□□□ 0.22
PTPRU-203ENST00000415600 TMEM17Q86X19 198 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 NCOR1P1Q9H4R4 102 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 IFT22Q9H7X7 185 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 SPACA1Q9HBV2 294 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 ANXA10Q9UJ72 324 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
PTPRU-203ENST00000415600 IGKV1D-8A0A087WSZ0 117 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 UBE2QL1A1L167 161 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 MMP23AO75900 390 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 HABP2Q14520 560 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-203ENST00000415600 NSUN5P1Q3KNT7 163 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 OVCH2Q7RTZ1 564 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 LHFPL1Q86WI0 220 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 TERB2Q8NHR7 220 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 C12orf4Q9NQ89 552 aa16.41■□□□□ 0.22
PTPRU-203ENST00000415600 KIAA2026Q5HYC2 2103 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 KBTBD11-OT1A0A1B0GTJ5 212 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 M0QZK8 103 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 GLAP06280 429 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 ANXA3P12429 323 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 TSPAN5P62079 268 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 CDK10Q15131 360 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 HLA-DRB5Q30154 266 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 OR9G1Q8NH87 305 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 EHFQ9NZC4 300 aa16.4■□□□□ 0.22
PTPRU-203ENST00000415600 MEIKINA0A087WXM9 373 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 A0A087X0M5 115 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 A0A1B0GX30 115 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 IGLV1-47P01700 117 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 C1QBP02746 253 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 OR4E1P0C645 316 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 CXCL3P19876 107 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 NFYBP25208 207 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 GLP1RP43220 463 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 RBM39Q14498 530 aaKnown RBP16.39■□□□□ 0.21
PTPRU-203ENST00000415600 TMED4Q7Z7H5 227 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 C1QL4Q86Z23 238 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 OR52B4Q8NGK2 314 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 COQ2Q96H96 371 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 TGP01266 2768 aa16.39■□□□□ 0.21
PTPRU-203ENST00000415600 MCRIP1C9JLW8 97 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 BUB1B-PAK6H3BSN5 160 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 HSPB6O14558 160 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 OR2F2O95006 317 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 ARPC4P59998 168 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 BLCAPP62952 87 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 SRSF7Q16629 238 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPRU-203ENST00000415600 C4orf46Q504U0 113 aa16.38■□□□□ 0.21
PTPRU-203ENST00000415600 NOXA1Q86UR1 476 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms