RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 HBE1P02100 147 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 MEOX1P50221 254 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 PSG7Q13046 419 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 CLN3Q13286 438 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 ACSF3Q4G176 576 aaPredicted RBP8.26□□□□□ -1.09
SS18-203ENST00000415083 SPINK9Q5DT21 86 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 NCOR1O75376 2440 aa8.26□□□□□ -1.09
SS18-203ENST00000415083 MGAQ8IWI9 3026 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 MAP1LC3B2A6NCE7 125 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 CEBPZOSA8MTT3 80 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 RPL23P62829 140 aaKnown RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 OR8G2PQ6IF36 304 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 BTNL3Q6UXE8 466 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 Q8TCH9 128 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 MAP1LC3BQ9GZQ8 125 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 DEFB127Q9H1M4 99 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 UNKLQ9H9P5 680 aaKnown RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 CSMD1Q96PZ7 3565 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 A0A087X0M5 115 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 A0A1B0GX30 115 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 ZG16O60844 167 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 IGHV1-2P23083 117 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 PMS2P11Q13670 270 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 C16orf82Q7Z2V1 217 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 CXorf67Q86X51 503 aaPredicted RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 C1orf159Q96HA4 380 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 DCTN5Q9BTE1 182 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 UFSP2Q9NUQ7 469 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 LRP5LA4QPB2 252 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 ZNF737O75373 536 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 SYNGR4O95473 234 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 IFNA5P01569 189 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 SP1P08047 785 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 SNRPCP09234 159 aaKnown RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 COL10A1Q03692 680 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 ZNF816Q0VGE8 651 aaPredicted RBP8.25□□□□□ -1.09
SS18-203ENST00000415083 P2RY6Q15077 328 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 GCSAMLQ5JQS6 135 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 TPRX1Q8N7U7 411 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 OR13D1Q8NGV5 346 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 AGMATQ9BSE5 352 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 SLC25A22Q9H936 323 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 TRAPPC2LQ9UL33 140 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 KCNS2Q9ULS6 477 aa8.25□□□□□ -1.09
SS18-203ENST00000415083 B4DEV8 164 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 SELLP14151 372 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 DDTP30046 118 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 SERF2P84101 59 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 PMP22Q01453 160 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 AESQ08117 197 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 FBXW9Q5XUX1 488 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 MRGPRGQ86SM5 289 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 UBALD2Q8IYN6 164 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 SLC25A40Q8TBP6 338 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 DDA1Q9BW61 102 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 OPA3Q9H6K4 179 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 KRASP01116 189 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 APLNRP35414 380 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 OR3A1P47881 315 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 TRIP6Q15654 476 aaKnown RBP8.24□□□□□ -1.09
SS18-203ENST00000415083 ZNF808Q8N4W9 903 aaPredicted RBP8.24□□□□□ -1.09
SS18-203ENST00000415083 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 RNASE11Q8TAA1 199 aaKnown RBP8.24□□□□□ -1.09
SS18-203ENST00000415083 WFIKKN1Q96NZ8 548 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 P2RX4Q99571 388 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 OR2D2Q9H210 308 aa8.24□□□□□ -1.09
SS18-203ENST00000415083 TMEM265A0A087WTH1 108 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 LRRC30A6NM36 301 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 CLDN34H7C241 214 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 PTBP3O95758 552 aaKnown RBP8.23□□□□□ -1.09
SS18-203ENST00000415083 IL2RGP31785 369 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 PPP1CBP62140 327 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 USF2Q15853 346 aaPredicted RBP8.23□□□□□ -1.09
SS18-203ENST00000415083 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 SPRNQ5BIV9 151 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 ABHD17BQ5VST6 288 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 C1orf210Q8IVY1 113 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 TMEM170AQ8WVE7 144 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 GAB2Q9UQC2 676 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
SS18-203ENST00000415083 HAND1O96004 215 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 GRPP07492 148 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 SSTR5P35346 364 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 OR5T1Q8NG75 326 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 PARLQ9H300 379 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 ADGRG4Q8IZF6 3080 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 LNP1A1A4G5 178 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 EGR1P18146 543 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
SS18-203ENST00000415083 CYP2G1PQ6ZSU1 146 aa8.23□□□□□ -1.09
SS18-203ENST00000415083 C1orf87Q8N0U7 546 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms