RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZNF154Q13106 437 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 MDS2Q8NDY4 140 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.78
PTPRF-205ENST00000414879 DYRK2Q92630 601 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 SPTBP11277 2137 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF320A2RRD8 509 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 ORM2P19652 201 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 ASPHD2Q6ICH7 369 aa10.21□□□□□ -0.78
PTPRF-205ENST00000414879 OR2A4O95047 310 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 GALR1P47211 349 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FABP9Q0Z7S8 132 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 AQP10Q96PS8 301 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 OR2A7Q96R45 310 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 ZDHHC11Q9H8X9 412 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 SLC25A22Q9H936 323 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM78BQ5VT40 261 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 ABHD12Q8N2K0 398 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 TMEM252Q8N6L7 170 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM169BQ8N8A8 192 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 GALNT14Q96FL9 552 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 SEC11CQ9BY50 192 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 SIRT7Q9NRC8 400 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 RCC2Q9P258 522 aaKnown RBP10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM74A7A6NL05 159 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM157AC9JC47 383 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 ADAM11O75078 769 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 IGHG3P01860 377 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 PGA5P0DJD9 388 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 HIST1H1BP16401 226 aaKnown RBP10.2□□□□□ -0.78
PTPRF-205ENST00000414879 P2RY4P51582 365 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM27E3Q08E93 113 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 SRSF7Q16629 238 aaKnown RBP eCLIP10.2□□□□□ -0.784e-7■■■■□ 20.9
PTPRF-205ENST00000414879 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-205ENST00000414879 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 MSRB2Q9Y3D2 182 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 ARHGEF17Q96PE2 2063 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-205ENST00000414879 FAM186AA6NE01 2351 aa10.2□□□□□ -0.78
PTPRF-205ENST00000414879 IGKV1D-43A0A0B4J1Z2 117 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 HYPMO75409 117 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 CLPSP04118 112 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 C19orf57Q0VDD7 668 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF146Q15072 292 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 CCL19Q99731 98 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 IGSF23A1L1A6 192 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 LINC00862A6NCI5 91 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 IGHV3-13P01766 116 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 IGHV3-7P01780 117 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 GAS1P54826 345 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 PSG7Q13046 419 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 SELENOHQ8IZQ5 122 aaKnown RBP10.19□□□□□ -0.78
PTPRF-205ENST00000414879 NHLRC2Q8NBF2 726 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 OR4D10Q8NGI6 311 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 FAM222BQ8WU58 562 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 LYRM2Q9NU23 88 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-205ENST00000414879 A0A0G2JK05 382 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 A0A1W2PPQ1 181 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 CYB5R3P00387 301 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-205ENST00000414879 RPS11P62280 158 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPRF-205ENST00000414879 C19orf35Q6ZS72 473 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 OR8I2Q8N0Y5 310 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 OR2T10Q8NGZ9 312 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 HIGD1AQ9Y241 93 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 LINC00312Q9Y6C7 94 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 TRAV39A0A0B4J263 110 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 C17orf51A8MQB3 221 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 TMEM11P17152 192 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 IFITM3Q01628 133 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 GGNQ86UU5 652 aa10.19□□□□□ -0.78
PTPRF-205ENST00000414879 KBTBD11O94819 623 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 TBR1Q16650 682 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 BSXQ3C1V8 233 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 SIGLECL1Q8N7X8 197 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 CLRN3Q8NCR9 226 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 GGACTQ9BVM4 153 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 METTL1Q9UBP6 276 aaKnown RBP10.18□□□□□ -0.78
PTPRF-205ENST00000414879 C11orf94C9JXX5 98 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 ORM1P02763 201 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 SULT1A2P50226 295 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 PQLC2Q6ZP29 291 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 WBP1Q96G27 269 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 ETV2O00321 342 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-205ENST00000414879 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 RPEL1Q2QD12 228 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 Q6ZS92 163 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 NPAS1Q99742 590 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 MEX3AA1L020 520 aaKnown RBP10.18□□□□□ -0.78
PTPRF-205ENST00000414879 ATP6V0CP27449 155 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 NPBWR2P48146 333 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 CBLN4Q9NTU7 201 aa10.18□□□□□ -0.78
PTPRF-205ENST00000414879 CRYGSP22914 178 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 PSG5Q15238 335 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms