RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TMEM86BQ8N661 226 aa24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 DRAXINQ8NBI3 349 aaPredicted RBP24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 OR5R1Q8NH85 324 aa24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 TRIM63Q969Q1 353 aa24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 NABP2Q9BQ15 211 aa24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 AKIP1Q9NQ31 210 aa24.56■■□□□ 1.52
CSNK1E-206ENST00000413574 CLDN34H7C241 214 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 CSF1P09603 554 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 TSPAN5P62079 268 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 ACTBL2Q562R1 376 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 RNASE10Q5GAN6 216 aaKnown RBP24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 VAX1Q5SQQ9 334 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 STEAP1BQ6NZ63 245 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 TMEM219Q86XT9 240 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 SECTM1Q8WVN6 248 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 CAPSLQ8WWF8 208 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 SDHCQ99643 169 aaPredicted RBP24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 VPREB3Q9UKI3 123 aa24.55■■□□□ 1.52
CSNK1E-206ENST00000413574 CD74P04233 296 aa24.54■■□□□ 1.52
CSNK1E-206ENST00000413574 GLDNQ6ZMI3 551 aaPredicted RBP24.54■■□□□ 1.52
CSNK1E-206ENST00000413574 OR6F1Q8NGZ6 308 aa24.54■■□□□ 1.52
CSNK1E-206ENST00000413574 TCF19Q9Y242 345 aa24.54■■□□□ 1.52
CSNK1E-206ENST00000413574 ANKRD20A5PA0PJZ0 165 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 M0R1X1 148 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 TXNL1O43396 289 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 IGLV2-14P01704 120 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 SNRNP70P08621 437 aaKnown RBP24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 CT45A6P0DMU7 189 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 CT45A5P0DMU8 189 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 CT45A7P0DMV0 189 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 FAM71F2Q6NXP2 309 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 TMEM17Q86X19 198 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 ZNF107Q9UII5 783 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 RAB3DO95716 219 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 RNASE1P07998 156 aaKnown RBP24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 ZNF45Q02386 682 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 HABP2Q14520 560 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 BAK1Q16611 211 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 ZNF645Q8N7E2 425 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 CCL28Q9NRJ3 127 aa24.53■■□□□ 1.52
CSNK1E-206ENST00000413574 FBN1P35555 2871 aaKnown RBP24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 FAM90A9PA6NNJ1 464 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 IFNA6P05013 189 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 HERV-K104P61576 105 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 LSAMPQ13449 338 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 LINC00299Q6ZSB3 139 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 ZNF436-AS1Q8NC38 126 aaPredicted RBP24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 TAF15Q92804 592 aaKnown RBP eCLIP24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 TAS2R8Q9NYW2 309 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 GAB2Q9UQC2 676 aa24.52■■□□□ 1.52
CSNK1E-206ENST00000413574 A6NDX4 124 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 IGKV1D-33P01593 117 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 IGKV1-33P01594 117 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 TBPP20226 339 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 GDPD1Q8N9F7 314 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 OR4C16Q8NGL9 310 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 FAM216AQ8WUB2 273 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 MOB3AQ96BX8 217 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 SLC5A7Q9GZV3 580 aa24.51■■□□□ 1.51
CSNK1E-206ENST00000413574 ATRQ13535 2644 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 TRIM77I1YAP6 450 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 CHST1O43916 411 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 GPR137BO60478 399 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 HES1Q14469 280 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 HNF4GQ14541 408 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 C16orf87Q6PH81 154 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 GPHA2Q96T91 129 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 FXYD6Q9H0Q3 95 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 OR5H14A6NHG9 310 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 ZNF735P0CB33 412 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 AKAIN1P0CW23 69 aa24.5■■□□□ 1.51
CSNK1E-206ENST00000413574 FAM181BA6NEQ2 426 aa24.49■■□□□ 1.51
CSNK1E-206ENST00000413574 AMY2AP04746 511 aa24.49■■□□□ 1.51
CSNK1E-206ENST00000413574 ZNF383Q8NA42 475 aa24.49■■□□□ 1.51
CSNK1E-206ENST00000413574 FAM106CPP0CH98 169 aa24.48■■□□□ 1.51
CSNK1E-206ENST00000413574 CD1BP29016 333 aa24.48■■□□□ 1.51
CSNK1E-206ENST00000413574 RIPPLY3P57055 190 aa24.48■■□□□ 1.51
CSNK1E-206ENST00000413574 KLF9Q13886 244 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-206ENST00000413574 AADACL3Q5VUY0 350 aa24.48■■□□□ 1.51
CSNK1E-206ENST00000413574 SCGB2B2Q4G0G5 96 aa24.47■■□□□ 1.51
CSNK1E-206ENST00000413574 THNSL2Q86YJ6 484 aa24.47■■□□□ 1.51
CSNK1E-206ENST00000413574 TOMM5Q8N4H5 51 aa24.47■■□□□ 1.51
CSNK1E-206ENST00000413574 ARRDC1Q8N5I2 433 aa24.47■■□□□ 1.51
CSNK1E-206ENST00000413574 EAF1Q96JC9 268 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-206ENST00000413574 H0YJW9 148 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 GNRHRP30968 328 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 MEF2DQ14814 521 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 ZNF818PQ6ZRF7 136 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 PITPNC1Q9UKF7 332 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 LINC00473A8K010 186 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 TNFSF12O43508 249 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 SLC22A5O76082 557 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 TMEM11P17152 192 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 DUTP33316 252 aaKnown RBP24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 LHFPL1Q86WI0 220 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 OR5AN1Q8NGI8 311 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 RITA1Q96K30 269 aa24.46■■□□□ 1.51
CSNK1E-206ENST00000413574 EBI3Q14213 229 aa24.45■■□□□ 1.5
CSNK1E-206ENST00000413574 ZNF57Q68EA5 555 aaPredicted RBP24.45■■□□□ 1.5
CSNK1E-206ENST00000413574 S100ZQ8WXG8 99 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms