RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SAPCD1Q5SSQ6 148 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HIST2H3PS2Q5TEC6 136 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 GPR157Q5UAW9 335 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 ASPHD2Q6ICH7 369 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 FAAP20Q6NZ36 180 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 DHRS11Q6UWP2 260 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HEPN1Q6WQI6 88 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 LHFPL1Q86WI0 220 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 ZNF679Q8IYX0 411 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 LFNGQ8NES3 379 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 GJC3Q8NFK1 279 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SLC26A10Q8NG04 563 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OR5L1Q8NGL2 311 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OR2AJ1Q8NGZ0 328 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OR4K13Q8NH42 304 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OTOSQ8NHW6 89 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 CCL17Q92583 94 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 RAB24Q969Q5 203 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 C2orf50Q96LR7 162 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 OR8B4Q96RC9 309 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 NMNAT3Q96T66 252 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 MICU1Q9BPX6 476 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 ZNF665Q9H7R5 613 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 TREM1Q9NP99 234 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 SIRT7Q9NRC8 400 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 TMEM242Q9NWH2 141 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 HIF1ANQ9NWT6 349 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 GHRLQ9UBU3 117 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 VSIG4Q9Y279 399 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 STRAPQ9Y3F4 350 aaKnown RBP4.4□□□□□ -1.71
LINC00342-201ENST00000412393 LHFPL6Q9Y693 200 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 CUBNO60494 3623 aa4.4□□□□□ -1.71
LINC00342-201ENST00000412393 MXRA5Q9NR99 2828 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 BTBD17A6NE02 478 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ZNF705EA8MWA4 302 aaPredicted RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 B4DEV8 164 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SEC14L6B5MCN3 397 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 TSTD3H0UI37 97 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 RER1O15258 196 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SYT7O43581 403 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 TCF21O43680 179 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SFT2D2O95562 160 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 HLA-DQA2P01906 255 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 MBP02144 154 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 GYPBP06028 91 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 PTHLHP12272 177 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 KITLGP21583 273 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 NFYBP25208 207 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SNCAP37840 140 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 KIR3DL2P43630 455 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 RBP2P50120 134 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 PLA2G7Q13093 441 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 PMS2P11Q13670 270 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 OR2B11Q5JQS5 317 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 KCTD18Q6PI47 426 aaPredicted RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 Q6ZR03 302 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SLC16A13Q7RTY0 426 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 CATSPERDQ86XM0 798 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 LINC00346Q8IVM7 164 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 OR5AS1Q8N127 324 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ZSCAN4Q8NAM6 433 aaPredicted RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 POC1AQ8NBT0 407 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 OR10G4Q8NGN3 311 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 RNASEH2CQ8TDP1 164 aaKnown RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ST7LQ8TDW4 575 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ITLN1Q8WWA0 313 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 HPSE2Q8WWQ2 592 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 DPF1Q92782 380 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 APOBEC3DQ96AK3 386 aaPredicted RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 CLCC1Q96S66 551 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SULT4A1Q9BR01 284 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 C19orf24Q9BVV8 132 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SELENOIQ9C0D9 397 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 SLC35B3Q9H1N7 401 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 FAM212BQ9NTI7 297 aaPredicted RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 GAR1Q9NY12 217 aaKnown RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 CKLFQ9UBR5 152 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 IL19Q9UHD0 177 aa4.39□□□□□ -1.71
LINC00342-201ENST00000412393 NOP16Q9Y3C1 178 aaKnown RBP4.39□□□□□ -1.71
LINC00342-201ENST00000412393 TMEM210A6NLX4 147 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 TMEM14DPA8MWL7 114 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 IQCF6A8MYZ5 107 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 C9JQL5 133 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 F5H5K5 113 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 J3QLI3 93 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 IFNL4K9M1U5 179 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 PNPP00491 289 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 LCATP04180 440 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 LINC00614P0C842 121 aa4.38□□□□□ -1.71
LINC00342-201ENST00000412393 ZNF823P16415 610 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms