RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SIGLECL1Q8N7X8 197 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 OR5H2Q8NGV7 314 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 FAM3DQ96BQ1 224 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 BANF2Q9H503 90 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 C11orf1Q9H5F2 150 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 ENY2Q9NPA8 101 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SPCS1Q9Y6A9 102 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 DOCK8Q8NF50 2099 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 CXorf51AA0A1B0GTR3 108 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PPM0 123 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 CA1P00915 261 aaPredicted RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 HLA-DRB1P01911 266 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 HBE1P02100 147 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 CATP04040 527 aaKnown RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 MYF5P13349 255 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 PMCHP20382 165 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 ECI1P42126 302 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 OR1D4P47884 311 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 INSL3P51460 131 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 TCL1AP56279 114 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 LCN6P62502 163 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 Q0VG73 95 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 ZNF761Q86XN6 746 aaPredicted RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 OR5D14Q8NGL3 314 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 KLHDC7BQ96G42 594 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 PDCD1LG2Q9BQ51 273 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 COMMD5Q9GZQ3 224 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 UPK3BL1B0FP48 263 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 ZNF732B4DXR9 585 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 UPK3BL2E5RIL1 263 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SYNGR1O43759 233 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 NTF3P20783 257 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 BSGP35613 385 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 KIR2DL1P43626 348 aaPredicted RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 SNU13P55769 128 aaKnown RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 SP4Q02446 784 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 AGERQ15109 404 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 FBXL22Q6P050 247 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SHISA6Q6ZSJ9 500 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 ZNF584Q8IVC4 421 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 TMEM178AQ8NBL3 297 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 GLYATL1Q969I3 302 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SCARF2Q96GP6 870 aaPredicted RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 RAB40CQ96S21 281 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 FAM103A1Q9BTL3 118 aaKnown RBP4.43□□□□□ -1.7
HERC4-205ENST00000412272 SAMD10Q9BYL1 202 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 GPR84Q9NQS5 396 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SPANXA1Q9NS26 97 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 NSG2Q9Y328 171 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 NUMA1Q14980 2115 aa4.43□□□□□ -1.7
HERC4-205ENST00000412272 SAA2-SAA4A0A096LPE2 208 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TRGV10A0A0A0MS01 117 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 A0A0G2JLL6 359 aaPredicted RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 C17orf112F2Z3M2 114 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 C3orf80F5H4A9 247 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SOCS1O15524 211 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ORM1P02763 201 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 FUT6P51993 359 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SEC11AP67812 179 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 PSG4Q00888 419 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TGFBR3Q03167 851 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 LRRC75BQ2VPJ9 315 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 HLA-DRB5Q30154 266 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 STUMQ69YW2 141 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 CHRDL2Q6WN34 429 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ADGRE4PQ86SQ3 457 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SPEM1Q8N4L4 309 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 RTN4IP1Q8WWV3 396 aaPredicted RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 LIN37Q96GY3 246 aaPredicted RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 VN1R3Q9BXE9 311 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 CLDND1Q9NY35 253 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ZNF835Q9Y2P0 537 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TRAV36DV7A0A075B6V5 113 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 KIR2DS1A0A191URI9 304 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MYBPHLA2RUH7 354 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 M0QZQ0 153 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 M0R2Z0 102 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MOSP00540 346 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ISG15P05161 165 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 JMJD7P0C870 316 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 LINC00694P0DN24 101 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 ALOX5APP20292 161 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 MYBPHQ13203 477 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 KIR2DS1Q14954 304 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 GLYATL3Q5SZD4 288 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 LRTM2Q8N967 370 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR10G7Q8NGN6 311 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SCAMP5Q8TAC9 235 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 OR51E1Q8TCB6 317 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TMEM255BQ8WV15 326 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 UBE2E3Q969T4 207 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 TMEM101Q96IK0 257 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 SPATA33Q96N06 139 aa4.42□□□□□ -1.7
HERC4-205ENST00000412272 GPX7Q96SL4 187 aaPredicted RBP4.42□□□□□ -1.7
HERC4-205ENST00000412272 SLC25A33Q9BSK2 321 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms