RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 FAM90A26D6RGX4 464 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CA6P23280 308 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CLDN12P56749 244 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 PPIAP62937 165 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CEACAM16Q2WEN9 425 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 RPS26P11Q5JNZ5 115 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 C1orf140Q5VVS0 124 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A2PQ658T7 463 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 B3GNT8Q7Z7M8 397 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 OTOSQ8NHW6 89 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CHST5Q9GZS9 411 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SF3B6Q9Y3B4 125 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 RICTORQ6R327 1708 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 GOLGA4Q13439 2230 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 H3BNC9 293 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 H3BP45 60 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 PITX3O75364 302 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 GYPBP06028 91 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 ACYP1P07311 99 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CD3EP07766 207 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 IL13P35225 146 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 Q6ZVU0 165 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 C1orf162Q8NEQ5 155 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SIGLEC8Q9NYZ4 499 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CHTOPQ9Y3Y2 248 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 PPIAL4AQ9Y536 164 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 HECW2Q9P2P5 1572 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 OVOS2A0A0J9YW53 1432 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 DHHO43323 396 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 AGAP20933 346 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SPINT3P49223 89 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 TAL2Q16559 108 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM52BQ4KMG9 183 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 ABHD15Q6UXT9 468 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 Q6ZNX1 250 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 COMMD6Q7Z4G1 85 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 ISL2Q96A47 359 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A37Q9NYZ2 338 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FRRS1LQ9P0K9 344 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 ZC3H13Q5T200 1668 aaKnown RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 NEO1Q92859 1461 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 GAGE12HA6NDE8 117 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A20PA6NIJ5 464 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 SPRY3O43610 288 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CGB7P0DN87 165 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 CST6Q15828 149 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FBXL22Q6P050 247 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 EGLN2Q96KS0 407 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 FNDC4Q9H6D8 234 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-202ENST00000411767 GLI2P10070 1586 aa3.99□□□□□ -1.77
PTPN13-202ENST00000411767 MAP3K4Q9Y6R4 1608 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TRGV4A0A0C4DH28 118 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 OR2H2O95918 312 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 INO80CQ6PI98 192 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ATP5L2Q7Z4Y8 100 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TP53INP2Q8IXH6 220 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 RNF185Q96GF1 192 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 YPEL2Q96QA6 119 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PLA2G3Q9NZ20 509 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FZR1Q9UM11 496 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF609O15014 1411 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 OVOS2Q6IE36 1432 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TFPI2P48307 235 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 RACK1P63244 317 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM78AQ5JUQ0 283 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 MRPL2Q5T653 305 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 CDC42EP5Q6NZY7 148 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A48Q6ZT89 311 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 MED25Q71SY5 747 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 LINC01587Q99440 93 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TLNRD1Q9H1K6 362 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 MED14O60244 1454 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PPRC1Q5VV67 1664 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 hCG_38984A0A1B0GV85 526 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A10PA6NDY2 464 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A8PA6NJQ4 464 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ATOX1O00244 68 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 DUSP14O95147 198 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A13PP0C7W8 464 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM90A24PP0C7X0 464 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 CST5P28325 142 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FOXG1P55316 489 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 IL11RAQ14626 422 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC2AQ6UVW9 174 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ORMDL3Q8N138 153 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SPXQ9BT56 116 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 MBNL3Q9NUK0 354 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TNS3Q68CZ2 1445 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 NRXN1Q9ULB1 1477 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PPIAL4EA0A075B759 164 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TRAV25A0A0B4J276 109 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 RS1O15537 224 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PPIAL4FP0DN26 164 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 NPPCP23582 126 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms