RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 FXYD4P59646 89 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 EIF4EBP1Q13541 118 aaPredicted RBP12.28□□□□□ -0.44
LSM5-207ENST00000410044 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
LSM5-207ENST00000410044 SSX2Q16385 188 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 DEFB112Q30KQ8 113 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 DRAM1Q8N682 238 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 BVESQ8NE79 360 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 SECTM1Q8WVN6 248 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 FXYD6Q9H0Q3 95 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 CCL28Q9NRJ3 127 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 HILPDAQ9Y5L2 63 aa12.28□□□□□ -0.44
LSM5-207ENST00000410044 SONP18583 2426 aaKnown RBP12.28□□□□□ -0.44
LSM5-207ENST00000410044 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 LYRM1O43325 122 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 ASAH1Q13510 395 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 SCGB2B2Q4G0G5 96 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 RPL39P5Q59GN2 51 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 Q6YL49 198 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.45
LSM5-207ENST00000410044 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
LSM5-207ENST00000410044 NABP2Q9BQ15 211 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 SLC25A21Q9BQT8 299 aaPredicted RBP12.27□□□□□ -0.45
LSM5-207ENST00000410044 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 TBC1D24Q9ULP9 559 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 GPR132Q9UNW8 380 aa12.27□□□□□ -0.45
LSM5-207ENST00000410044 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 BTCP35070 178 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 IDO2Q6ZQW0 420 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 ZNF818PQ6ZRF7 136 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 THNSL2Q86YJ6 484 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 ZFAND1Q8TCF1 268 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 CFHR4Q92496 578 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 SCGB3A2Q96PL1 93 aa12.26□□□□□ -0.45
LSM5-207ENST00000410044 LINC00854A0A1B0GVQ3 168 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 GPR31O00270 319 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 CTSDP07339 412 aaPredicted RBP12.25□□□□□ -0.45
LSM5-207ENST00000410044 CD1BP29016 333 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 SLC6A1P30531 599 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 BRS3P32247 399 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
LSM5-207ENST00000410044 ARHGDIBP52566 201 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 RND3P61587 244 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
LSM5-207ENST00000410044 EBI3Q14213 229 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 PIFOQ8TCI5 191 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 C22orf15Q8WYQ4 148 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 ADTRPQ96IZ2 230 aa12.25□□□□□ -0.45
LSM5-207ENST00000410044 HSD17B10Q99714 261 aaKnown RBP12.25□□□□□ -0.45
LSM5-207ENST00000410044 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
LSM5-207ENST00000410044 M0R1X1 148 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
LSM5-207ENST00000410044 MC5RP33032 325 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 IER3P46695 156 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 REG1BP48304 166 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 THBS3P49746 956 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
LSM5-207ENST00000410044 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 MZT2BQ6NZ67 158 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 C16orf87Q6PH81 154 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 ZDHHC22Q8N966 263 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 ZNF383Q8NA42 475 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 DDB2Q92466 427 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 SSX3Q99909 188 aa12.24□□□□□ -0.45
LSM5-207ENST00000410044 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
LSM5-207ENST00000410044 MRPL20Q9BYC9 149 aaKnown RBP12.24□□□□□ -0.45
LSM5-207ENST00000410044 MDFIC2A0A1B0GVS7 189 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 LINC00473A8K010 186 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 TIMM23O14925 209 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 NDUFB6O95139 128 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 PGAM2P15259 253 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 PAX6P26367 422 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 CCR6P51684 374 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 RPL30P62888 115 aaKnown RBP12.23□□□□□ -0.45
LSM5-207ENST00000410044 MOB3BQ86TA1 216 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 TMEM86BQ8N661 226 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 C5orf66Q9H5L9 145 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 FAM212BQ9NTI7 297 aaPredicted RBP12.23□□□□□ -0.45
LSM5-207ENST00000410044 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
LSM5-207ENST00000410044 A0A0A6YYJ9 748 aa12.22□□□□□ -0.45
LSM5-207ENST00000410044 H0YJW9 148 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms