RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NDUFB4O95168 129 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 RECKO95980 971 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A15PP0C7V4 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A13PP0C7W8 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A14PP0C7W9 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A24PP0C7X0 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 PLPPR2Q96GM1 343 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 GNRHR2Q96P88 292 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 SLC17A3O00476 420 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 CDC42EP2O14613 210 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 ID4P47928 161 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 RSPO2Q6UXX9 243 aaPredicted RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 LINC00518Q8N0U6 118 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 AICDAQ9GZX7 198 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 SPSB4Q96A44 273 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM30AQ9NV96 361 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 LY75O60449 1722 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FGF5P12034 268 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 HTN1P15515 57 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 RBM11P57052 281 aaKnown RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 MRPL24Q96A35 216 aaKnown RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 WNT5BQ9H1J7 359 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 PCOLCE2Q9UKZ9 415 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 RNASE1P07998 156 aaKnown RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 ATG4DQ86TL0 474 aaPredicted RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF441Q8N8Z8 693 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 RABAC1Q9UI14 185 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 PNLIPP16233 465 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 ZDHHC8Q9ULC8 765 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 DLL1O00548 723 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 MRPS18AQ9NVS2 196 aaKnown RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 FZR1Q9UM11 496 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 NMBP08949 121 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 TP53I13Q8NBR0 393 aaPredicted RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 CCL28Q9NRJ3 127 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 H7C1H1 209 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 CA7P43166 264 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 CCL4L1Q8NHW4 92 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 TRPM7Q96QT4 1865 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 OR11H12B2RN74 326 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 HBBP68871 147 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 LCN2P80188 198 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 KIAA0040Q15053 153 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 OR11H1Q8NG94 326 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 GPBAR1Q8TDU6 330 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 SFXN3Q9BWM7 321 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 ATP5LO75964 103 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 LOC285556D6RIA3 1793 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 B4GALNT1Q00973 533 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 CD300CQ08708 224 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
SHANK2-203ENST00000409161 HELZP42694 1942 aaKnown RBP10.59□□□□□ -0.71
SHANK2-203ENST00000409161 DMRTC1Q5HYR2 192 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 SAMD13Q5VXD3 122 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NUDT10Q8NFP7 164 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 MS4A7Q9GZW8 240 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 MS4A5Q9H3V2 200 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 DPRXA6NFQ7 191 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 EIF3GO75821 320 aaKnown RBP eCLIP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 VEGFBP49765 207 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 VSTM2LQ96N03 204 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 ZNF430Q9H8G1 570 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 SLC25A10Q9UBX3 287 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NDUFS8O00217 210 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 MESTQ5EB52 335 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NPIPB8E9PQR5 432 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NPIPB9F8W1W9 429 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NPIPB7O75200 414 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 EML2O95834 649 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 RPL8P62917 257 aaKnown RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 OR1K1Q8NGR3 316 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 NYNRINQ9P2P1 1898 aaKnown RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 FAM157AC9JC47 383 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 PSMG3Q9BT73 122 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 IL36RNQ9UBH0 155 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 PKDREJQ9NTG1 2253 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 FAM106CPP0CH98 169 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 RGP1Q92546 391 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-203ENST00000409161 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
SHANK2-203ENST00000409161 A0A1B0GTL3 188 aa10.57□□□□□ -0.72
SHANK2-203ENST00000409161 C21orf140B9A014 251 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms