RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 A6NLC8 198 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 FAM90A26D6RGX4 464 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 RNASEK-C17orf49H0YIS7 233 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 M0R1B8 84 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 ZNF205O95201 554 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 PRH1P02810 166 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 CECR9P0C854 216 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 IL2RGP31785 369 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 TAS2R30P59541 319 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 DPPA3Q6W0C5 159 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 ACP7Q6ZNF0 438 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 Q6ZRG5 221 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 LYPD6BQ8NI32 183 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 IL1F10Q8WWZ1 152 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 SMIM3Q9BZL3 60 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 LAMP3Q9UQV4 416 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 KPTNQ9Y664 436 aa10.79□□□□□ -0.68
SMARCB1-203ENST00000407082 IGHV2OR16-5A0A0B4J2B6 119 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 A0A1B0GWJ7 208 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 TOR1AO14656 332 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 TSPAN4O14817 238 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 LY86O95711 162 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 IFNA5P01569 189 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 RCC1P18754 421 aaPredicted RBP10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 CEACAM6P40199 344 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 PAX5Q02548 391 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 ZNF273Q14593 569 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 MST1LQ2TV78 715 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 TMEM108Q6UXF1 575 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 WDR86Q86TI4 376 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 ERGIC1Q969X5 290 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 PLPPR2Q96GM1 343 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 C11orf1Q9H5F2 150 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 ESRP2Q9H6T0 727 aaKnown RBP10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 YAE1D1Q9NRH1 226 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 OR14J1Q9UGF5 321 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 KCNS2Q9ULS6 477 aa10.78□□□□□ -0.68
SMARCB1-203ENST00000407082 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 DPRXA6NFQ7 191 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 DEFB108AA8MXU0 73 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 ABCD4O14678 606 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 SIAH2O43255 324 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 SPINT2O43291 252 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 SSSCA1O60232 199 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 HBE1P02100 147 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 CRYAAP02489 173 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 ADH4P08319 380 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 PTAFRP25105 342 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 CD40P25942 277 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 CFHR2P36980 270 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 MPV17P39210 176 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 LPAR6P43657 344 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 POLR2GP62487 172 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 BSPH1Q075Z2 132 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 NCMAPQ5T1S8 102 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 C20orf204Q6ZNR8 217 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 TMEM252Q8N6L7 170 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 ZNF645Q8N7E2 425 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 COA4Q9NYJ1 87 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 WSB1Q9Y6I7 421 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 DSCAMO60469 2012 aa10.77□□□□□ -0.69
SMARCB1-203ENST00000407082 A0A1B0GW64 132 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 FAM24AA6NFZ4 105 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 CD5P06127 495 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 OR8U9P0C7N5 309 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 GZMHP20718 246 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 GLRXP35754 106 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 FABP6P51161 128 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 AKR1C2P52895 323 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 HBG1P69891 147 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 HBG2P69892 147 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 NHLH2Q02577 135 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 MIDNQ504T8 468 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 ZNF66Q6ZN08 573 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 EDARADDQ8WWZ3 215 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 GPR146Q96CH1 333 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 NCOR1P1Q9H4R4 102 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 UNKLQ9H9P5 680 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 C19orf12Q9NSK7 152 aa10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
SMARCB1-203ENST00000407082 CADP27708 2225 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 H0YL77 283 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 MLNRO43193 412 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 CHST1O43916 411 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 CD3EP07766 207 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 PSG2P11465 335 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 SNCAP37840 140 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 SULT1A1P50225 295 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 ARHGDIBP52566 201 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms