RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 LAMA1P25391 3075 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 S100GP29377 79 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 UBE2NP61088 152 aaKnown RBP13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 RHBDD2Q6NTF9 364 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 TBC1D26Q86UD7 250 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM217Q8N7C4 229 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 OR2Y1Q8NGV0 311 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 LRFN3Q9BTN0 628 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 OR2T8A6NH00 312 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 ADAM20O43506 726 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 RUNX1Q01196 453 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 CLEC12BQ2HXU8 276 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 Q6ZS52 159 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 C5orf17Q8NAS9 161 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 TAAR6Q96RI8 345 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 SIGMAR1Q99720 223 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 HSPB9Q9BQS6 159 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 IL36GQ9NZH8 169 aa13.81□□□□□ -0.2
COL4A3BP-204ENST00000405807 RTTNQ86VV8 2226 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 TRAV1-1A0A0B4J248 108 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 IGKV1-12A0A0C4DH73 117 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 LOC102723971A0A1B0GUV8 181 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 DUXBA0A1W2PPF3 345 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 NPIPA3F8WFD2 350 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 NRASP01111 189 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 IGKV1D-12P01611 117 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 ID3Q02535 119 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 SPIN3Q5JUX0 258 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 WDR82Q6UXN9 313 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 ATP5SQ99766 215 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 DLX2Q07687 328 aaPredicted RBP13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 FADS6Q8N9I5 356 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 CTDSP1Q9GZU7 261 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 CDC42EP3Q9UKI2 254 aa13.8□□□□□ -0.2
COL4A3BP-204ENST00000405807 SHISA7A6NL88 538 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 CCL2P13500 99 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM249Q2WGJ8 235 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 FAM27BQ5VT28 67 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 CMTM2Q8TAZ6 248 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 ULBP2Q9BZM5 246 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 FER1L5A0AVI2 2057 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 IGHV1OR15-9A0A0B4J2B8 117 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 IGLC7A0M8Q6 106 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 LILRA1O75019 489 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 CRYGSP22914 178 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 LRRC10Q5BKY1 277 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM123Q8N131 208 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 OR1B1Q8NGR6 318 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 BTF3L4Q96K17 158 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 GNG13Q9P2W3 67 aa13.79□□□□□ -0.2
COL4A3BP-204ENST00000405807 A0A0U1RQK1 487 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 CHST1O43916 411 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 VDAC1P21796 283 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZNF83P51522 516 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 FUT6P51993 359 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 C1orf174Q8IYL3 243 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 BATF2Q8N1L9 274 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 CADM4Q8NFZ8 388 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 DPF1Q92782 380 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 SLC7A10Q9NS82 523 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 SS18L2Q9UHA2 77 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 H7BYZ3 331 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM50AO95807 157 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 TIMP3P35625 211 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 TPPP2P59282 170 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 MRPS34P82930 218 aaKnown RBP13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZFP36L1Q07352 338 aaKnown RBP13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 ZNF154Q13106 437 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 PDCD1Q15116 288 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM42Q69YG0 159 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 SIGLEC12Q96PQ1 595 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 CISD1Q9NZ45 108 aaKnown RBP13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 SHANK1Q9Y566 2161 aa13.78□□□□□ -0.2
COL4A3BP-204ENST00000405807 TAX1BP3O14907 124 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 RHBDL1O75783 438 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 IFNA5P01569 189 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 GDF1P27539 372 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 NMSQ5H8A3 153 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 TMEM140Q9NV12 185 aa13.77□□□□□ -0.2
COL4A3BP-204ENST00000405807 TRBV7-9A0A0J9YWB2 115 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 TIAF1O95411 115 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 GCH1P30793 250 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 RBM11P57052 281 aaKnown RBP13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 Q6ZPA2 131 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 BOD1L2Q8IYS8 172 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 SYNGR3O43761 229 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR7C1O76099 320 aaPredicted RBP13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 MPLP40238 635 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms