RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GAPDHP04406 335 aaKnown RBP26.87■■□□□ 1.89
CSNK1E-204ENST00000403904 TGIF2LXQ8IUE1 241 aa26.87■■□□□ 1.89
CSNK1E-204ENST00000403904 DRAM1Q8N682 238 aa26.87■■□□□ 1.89
CSNK1E-204ENST00000403904 SLC2A8Q9NY64 477 aa26.87■■□□□ 1.89
CSNK1E-204ENST00000403904 ZNF816Q0VGE8 651 aaPredicted RBP26.86■■□□□ 1.89
CSNK1E-204ENST00000403904 GAB2Q9UQC2 676 aa26.86■■□□□ 1.89
CSNK1E-204ENST00000403904 NIPBLQ6KC79 2804 aaeCLIP26.86■■□□□ 1.89
CSNK1E-204ENST00000403904 CENPXA8MT69 81 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 GNRHRP30968 328 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 BAMBIQ13145 260 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 ZNF818PQ6ZRF7 136 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 ZNF436-AS1Q8NC38 126 aaPredicted RBP26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 OR13C8Q8NGS7 320 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 MEGF9Q9H1U4 602 aa26.85■■□□□ 1.89
CSNK1E-204ENST00000403904 OOSP1A8MZH6 123 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 SLC22A5O76082 557 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 SCGB2A2Q13296 93 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 DRAXINQ8NBI3 349 aaPredicted RBP26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 BORCS5Q969J3 196 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 C7orf50Q9BRJ6 194 aaKnown RBP26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 TBC1D24Q9ULP9 559 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 IGHV1-3A0A0C4DH29 117 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 A0A1W2PPI3 338 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 NAP1L6A6NFF2 107 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 M0R1X1 148 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 LYRM1O43325 122 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 LINC00205P59089 165 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 CCDC144NLQ6NUI1 221 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 FAM71F2Q6NXP2 309 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 C16orf87Q6PH81 154 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 MARCH1Q8TCQ1 289 aa26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 MRPL20Q9BYC9 149 aaKnown RBP26.84■■□□□ 1.89
CSNK1E-204ENST00000403904 PGAM2P15259 253 aa26.83■■□□□ 1.89
CSNK1E-204ENST00000403904 UCP3P55916 312 aa26.83■■□□□ 1.89
CSNK1E-204ENST00000403904 ZDHHC16Q969W1 377 aa26.83■■□□□ 1.89
CSNK1E-204ENST00000403904 GPHA2Q96T91 129 aa26.83■■□□□ 1.89
CSNK1E-204ENST00000403904 RAB13P51153 203 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 CCR6P51684 374 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 TUSC1Q2TAM9 212 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 MOB3BQ86TA1 216 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 OR8H3Q8N146 312 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 SIGLECL1Q8N7X8 197 aa26.82■■□□□ 1.88
CSNK1E-204ENST00000403904 TIMM23O14925 209 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 TXNL1O43396 289 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 FAM157CP0CG43 387 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 CT45A6P0DMU7 189 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 CT45A5P0DMU8 189 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 CT45A7P0DMV0 189 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 BTCP35070 178 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 LPCAT3Q6P1A2 487 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 NABP2Q9BQ15 211 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 RSRP1Q9BUV0 290 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 OCEL1Q9H607 264 aa26.81■■□□□ 1.88
CSNK1E-204ENST00000403904 TNFSF12O43508 249 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 GLDNQ6ZMI3 551 aaPredicted RBP26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 SLC38A6Q8IZM9 456 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 SSX3Q99909 188 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 PRDM13Q9H4Q3 707 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 IGHV3-72A0A0B4J1Y9 119 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 PI3P19957 117 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 ASAH1Q13510 395 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 RBMXL1Q96E39 390 aaKnown RBP26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 AKR1E2Q96JD6 320 aa26.8■■□□□ 1.88
CSNK1E-204ENST00000403904 CD24P25063 80 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 ARHGDIBP52566 201 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 MSMO1Q15800 293 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 PHLDA2Q53GA4 152 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 Q6YL49 198 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 BVESQ8NE79 360 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 CFHR4Q92496 578 aa26.79■■□□□ 1.88
CSNK1E-204ENST00000403904 GPR31O00270 319 aa26.78■■□□□ 1.88
CSNK1E-204ENST00000403904 ECI1P42126 302 aa26.78■■□□□ 1.88
CSNK1E-204ENST00000403904 LRRC75BQ2VPJ9 315 aa26.78■■□□□ 1.88
CSNK1E-204ENST00000403904 ZBTB34Q8NCN2 500 aa26.78■■□□□ 1.88
CSNK1E-204ENST00000403904 LINC00473A8K010 186 aa26.77■■□□□ 1.88
CSNK1E-204ENST00000403904 VGLL3A8MV65 326 aa26.77■■□□□ 1.88
CSNK1E-204ENST00000403904 DUTP33316 252 aaKnown RBP26.77■■□□□ 1.88
CSNK1E-204ENST00000403904 EIF4EBP1Q13541 118 aaPredicted RBP26.77■■□□□ 1.88
CSNK1E-204ENST00000403904 ZNF383Q8NA42 475 aa26.77■■□□□ 1.88
CSNK1E-204ENST00000403904 BRS3P32247 399 aa26.76■■□□□ 1.87
CSNK1E-204ENST00000403904 CMTM1Q8IZ96 169 aa26.76■■□□□ 1.87
CSNK1E-204ENST00000403904 ZFAND1Q8TCF1 268 aa26.76■■□□□ 1.87
CSNK1E-204ENST00000403904 GPR132Q9UNW8 380 aa26.76■■□□□ 1.87
CSNK1E-204ENST00000403904 IGHV4-59P01825 116 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 RPL30P62888 115 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 HABP2Q14520 560 aaPredicted RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 SURF2Q15527 256 aaPredicted RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 RBMS3Q6XE24 437 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 PIFOQ8TCI5 191 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 VSIG4Q9Y279 399 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 H3BUX3 64 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 IER3P46695 156 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 RBMS2Q15434 407 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 ABCA11PQ4W5N1 156 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 MZT2BQ6NZ67 158 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 HSD17B10Q99714 261 aaKnown RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 SLC25A21Q9BQT8 299 aaPredicted RBP26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 SLC2A9Q9NRM0 540 aa26.75■■□□□ 1.87
CSNK1E-204ENST00000403904 HOXA3O43365 443 aaPredicted RBP26.74■■□□□ 1.87
CSNK1E-204ENST00000403904 PGLYRP1O75594 196 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms