RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 OR2B11Q5JQS5 317 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 ZNF841Q6ZN19 808 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 LSM10Q969L4 123 aaKnown RBP21.08■□□□□ 0.97
CPNE1-205ENST00000401607 AQP10Q96PS8 301 aa21.08■□□□□ 0.97
CPNE1-205ENST00000401607 BCL2L11O43521 198 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 CDKN1AP38936 164 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 EXOSC2Q13868 293 aaKnown RBP21.08■□□□□ 0.96
CPNE1-205ENST00000401607 RPL39P5Q59GN2 51 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 HEPN1Q6WQI6 88 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 GAB2Q9UQC2 676 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 POMT1Q9Y6A1 747 aa21.08■□□□□ 0.96
CPNE1-205ENST00000401607 ST8SIA3O43173 380 aa21.07■□□□□ 0.96
CPNE1-205ENST00000401607 RLN2P04090 185 aa21.07■□□□□ 0.96
CPNE1-205ENST00000401607 DUTP33316 252 aaKnown RBP21.07■□□□□ 0.96
CPNE1-205ENST00000401607 THOC7Q6I9Y2 204 aaKnown RBP21.07■□□□□ 0.96
CPNE1-205ENST00000401607 C1orf229Q6ZS94 237 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-205ENST00000401607 SPAG16Q8N0X2 631 aa21.07■□□□□ 0.96
CPNE1-205ENST00000401607 ZFP57Q9NU63 452 aa21.07■□□□□ 0.96
CPNE1-205ENST00000401607 DLX6P56179 175 aa21.06■□□□□ 0.96
CPNE1-205ENST00000401607 ODF3L1Q8IXM7 274 aa21.06■□□□□ 0.96
CPNE1-205ENST00000401607 TCTEX1D1Q8N7M0 179 aa21.06■□□□□ 0.96
CPNE1-205ENST00000401607 FAM212BQ9NTI7 297 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-205ENST00000401607 RCL1Q9Y2P8 373 aaKnown RBP21.06■□□□□ 0.96
CPNE1-205ENST00000401607 KANTRA0A1W2PQU2 76 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 PITX3O75364 302 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 SLC25A6P12236 298 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 NKX2-1P43699 371 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-205ENST00000401607 GNG10P50151 68 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 ZNF816Q0VGE8 651 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-205ENST00000401607 IZUMO4Q1ZYL8 232 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 TMEM155Q4W5P6 130 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 NCR3LG1Q68D85 454 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 Q6ZRM9 215 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 SLC51BQ86UW2 128 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 DMBX1Q8NFW5 382 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 A0A1B0GU03 582 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 M0R1X1 148 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 HKR1P10072 659 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 EPHA1P21709 976 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 AKR1C2P52895 323 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 CXorf66Q5JRM2 361 aaPredicted RBP21.05■□□□□ 0.96
CPNE1-205ENST00000401607 RNASE11Q8TAA1 199 aaKnown RBP21.05■□□□□ 0.96
CPNE1-205ENST00000401607 ZNF251Q9BRH9 671 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 C11orf1Q9H5F2 150 aa21.05■□□□□ 0.96
CPNE1-205ENST00000401607 SAA2-SAA4A0A096LPE2 208 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 TRBV23-1A0A0A0MS06 115 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 E5RGE8 158 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 PPIHO43447 177 aaKnown RBP21.04■□□□□ 0.96
CPNE1-205ENST00000401607 S1PR2O95136 353 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 IFNA7P01567 189 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 SAA2P0DJI9 122 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-205ENST00000401607 NUP62P37198 522 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-205ENST00000401607 SLC25A48Q6ZT89 311 aaKnown RBP21.04■□□□□ 0.96
CPNE1-205ENST00000401607 RAB1CQ92928 201 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 CHODLQ9H9P2 273 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 NSG2Q9Y328 171 aa21.04■□□□□ 0.96
CPNE1-205ENST00000401607 NDUFS7O75251 213 aa21.03■□□□□ 0.96
CPNE1-205ENST00000401607 ATP6V1G1O75348 118 aa21.03■□□□□ 0.96
CPNE1-205ENST00000401607 ID3Q02535 119 aa21.03■□□□□ 0.96
CPNE1-205ENST00000401607 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-205ENST00000401607 TIMD4Q96H15 378 aa21.03■□□□□ 0.96
CPNE1-205ENST00000401607 ARPC5LQ9BPX5 153 aa21.03■□□□□ 0.96
CPNE1-205ENST00000401607 YLPM1P49750 1951 aaKnown RBP21.03■□□□□ 0.96
CPNE1-205ENST00000401607 GOSR1O95249 250 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 HTR2BP41595 481 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 POLR2GP62487 172 aaKnown RBP eCLIP21.02■□□□□ 0.96
CPNE1-205ENST00000401607 LYG1Q8N1E2 194 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 KLF2Q9Y5W3 355 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-205ENST00000401607 LRBAP50851 2863 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 RAB29O14966 203 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 ZNRD1Q9P1U0 126 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 CACNG5Q9UF02 275 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 MIOXQ9UGB7 285 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 UBQLN2Q9UHD9 624 aa21.02■□□□□ 0.96
CPNE1-205ENST00000401607 ARID1AO14497 2285 aa21.01■□□□□ 0.95
CPNE1-205ENST00000401607 KIAA1324LA8MWY0 1029 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-205ENST00000401607 SPDEFO95238 335 aa21.01■□□□□ 0.95
CPNE1-205ENST00000401607 P0C879 139 aa21.01■□□□□ 0.95
CPNE1-205ENST00000401607 RPL12P30050 165 aaKnown RBP21.01■□□□□ 0.95
CPNE1-205ENST00000401607 SLC7A5P1Q8MH63 180 aa21.01■□□□□ 0.95
CPNE1-205ENST00000401607 NEIL1Q96FI4 390 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-205ENST00000401607 MMP24Q9Y5R2 645 aa21.01■□□□□ 0.95
CPNE1-205ENST00000401607 NXPH3O95157 252 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 F12P00748 615 aaPredicted RBP21■□□□□ 0.95
CPNE1-205ENST00000401607 G6PCP35575 357 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 NDUFA5Q16718 116 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 C11orf42Q8N5U0 333 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 OR8B3Q8NGG8 313 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 ST8SIA2Q92186 375 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 DDB2Q92466 427 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 OR8B2Q96RD0 313 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 ZNF471Q9BX82 626 aaPredicted RBP21■□□□□ 0.95
CPNE1-205ENST00000401607 MAGT1Q9H0U3 335 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 PLEKHA2Q9HB19 425 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 CYTL1Q9NRR1 136 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 USF3Q68DE3 2245 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 GPR37O15354 613 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 P2RY1P47900 373 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 TMEM33P57088 247 aa21■□□□□ 0.95
CPNE1-205ENST00000401607 UBA52P62987 128 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms