RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
UFD1-202ENST00000399523 LGALS12Q96DT0 336 aa13.49□□□□□ -0.25
UFD1-202ENST00000399523 TECRQ9NZ01 308 aaKnown RBP13.49□□□□□ -0.25
UFD1-202ENST00000399523 STEAP1Q9UHE8 339 aa13.49□□□□□ -0.25
UFD1-202ENST00000399523 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
UFD1-202ENST00000399523 UBE2QL1A1L167 161 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 BMPR1BO00238 502 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 RBMXL2O75526 392 aaKnown RBP13.48□□□□□ -0.25
UFD1-202ENST00000399523 IGKV1-16P04430 117 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 MED14OSP0DP75 135 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 C6orf141Q5SZD1 244 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 SIGIRRQ6IA17 410 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 WDR89Q96FK6 387 aaPredicted RBP13.48□□□□□ -0.25
UFD1-202ENST00000399523 OR14A2Q96R54 314 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 ZNF184Q99676 751 aaPredicted RBP13.48□□□□□ -0.25
UFD1-202ENST00000399523 AGMATQ9BSE5 352 aa13.48□□□□□ -0.25
UFD1-202ENST00000399523 FAT2Q9NYQ8 4349 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 CPEP16870 476 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 BMI1P35226 326 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 LGALS7P47929 136 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 GBX2P52951 348 aaPredicted RBP13.47□□□□□ -0.25
UFD1-202ENST00000399523 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
UFD1-202ENST00000399523 PRR20EP86478 221 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 PRR20CP86479 221 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 PRR20DP86480 221 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 PRR20BP86481 221 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 PRR20AP86496 221 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 HMGN3Q15651 99 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
UFD1-202ENST00000399523 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 POMPQ9Y244 141 aa13.47□□□□□ -0.25
UFD1-202ENST00000399523 C2orf70A6NJV1 201 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 H3BNX3 289 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 FOLR2P14207 255 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 GTF2A1P52655 376 aaPredicted RBP13.46□□□□□ -0.25
UFD1-202ENST00000399523 RPS16P62249 146 aaKnown RBP13.46□□□□□ -0.25
UFD1-202ENST00000399523 Q6ZWC4 215 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 ABHD14BQ96IU4 210 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 SULT4A1Q9BR01 284 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 ERVK13-1Q9NX77 482 aa13.46□□□□□ -0.25
UFD1-202ENST00000399523 ITGB1BP1O14713 200 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 SPRY2O43597 315 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 PROP1O75360 226 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 IGFBP3P17936 291 aaPredicted RBP13.45□□□□□ -0.26
UFD1-202ENST00000399523 PJVKQ0ZLH3 352 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 RIPK1Q13546 671 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 GLIPR1L1Q6UWM5 242 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 DRAXINQ8NBI3 349 aaPredicted RBP13.45□□□□□ -0.26
UFD1-202ENST00000399523 IL1F10Q8WWZ1 152 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 Q96M66 194 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 SELENOIQ9C0D9 397 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 BANF2Q9H503 90 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 ABRACLQ9P1F3 81 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 DNAH2Q9P225 4427 aa13.45□□□□□ -0.26
UFD1-202ENST00000399523 SNTNA6NMZ2 147 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 PDCD6O75340 191 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 BAG2O95816 211 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 CRYGBP07316 175 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 EDN2P20800 178 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 PDPNQ86YL7 162 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 ADAD2Q8NCV1 583 aaKnown RBP13.44□□□□□ -0.26
UFD1-202ENST00000399523 MUL1Q969V5 352 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
UFD1-202ENST00000399523 ZNF230Q9UIE0 474 aaPredicted RBP13.44□□□□□ -0.26
UFD1-202ENST00000399523 DYNC1H1Q14204 4646 aaKnown RBP13.43□□□□□ -0.26
UFD1-202ENST00000399523 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 MGMTP16455 207 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 CAPGP40121 348 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 GYS2P54840 703 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 LINC00205P59089 165 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 TMEM217Q8N7C4 229 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 ZNF383Q8NA42 475 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 AKIP1Q9NQ31 210 aa13.43□□□□□ -0.26
UFD1-202ENST00000399523 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
UFD1-202ENST00000399523 LGALS9O00182 355 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 FASP25445 335 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 RPL22L1Q6P5R6 122 aaKnown RBP13.42□□□□□ -0.26
UFD1-202ENST00000399523 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 OR52B4Q8NGK2 314 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 DMRT1Q9Y5R6 373 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
UFD1-202ENST00000399523 A0A1B0GVY2 172 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 FAM223BA6NKX1 122 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 CBLN1P23435 193 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 RHOGP84095 191 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 EXOSC2Q13868 293 aaKnown RBP13.41□□□□□ -0.26
UFD1-202ENST00000399523 DEFB135Q30KP9 77 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 ANKRD55Q3KP44 614 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 LINC00336Q6ZUF6 198 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 FAM223AQ8IWN6 122 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 KCNG3Q8TAE7 436 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 C11orf54Q9H0W9 315 aaPredicted RBP13.41□□□□□ -0.26
UFD1-202ENST00000399523 DNAH17Q9UFH2 4485 aa13.41□□□□□ -0.26
UFD1-202ENST00000399523 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
UFD1-202ENST00000399523 UBE2CO00762 179 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms