RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 MRPL37Q9BZE1 423 aaKnown RBP19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 UBE2L5PA0A1B0GUS4 154 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 A0A1W2PPE3 182 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 ODAMA1E959 279 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 SMIM6P0DI80 62 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 GLIPR1P48060 266 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 FOXF2Q12947 444 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 DEFB124Q8NES8 71 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 TMEM147Q9BVK8 224 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 ZNF665Q9H7R5 613 aa19.32■□□□□ 0.68
RABGGTA-202ENST00000399409 IGHV1-18A0A0C4DH31 117 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 ZFP92A6NM28 416 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 C17orf98A8MV24 154 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 SPINT2O43291 252 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 ADH4P08319 380 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 HTD2P86397 168 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 FABP9Q0Z7S8 132 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 OR8G2PQ6IF36 304 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 FAM216AQ8WUB2 273 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 MSL2Q9HCI7 577 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 ZNF71Q9NQZ8 489 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 VAX2Q9UIW0 290 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 MAP1LC3B2A6NCE7 125 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 ZNF727A8MUV8 499 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 AP4M1O00189 453 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 S100A9P06702 114 aaKnown RBP19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 OR2B8PP59922 312 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 RAB11AP62491 216 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 OR2B11Q5JQS5 317 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 FAM90A2PQ658T7 463 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 BHLHA15Q7RTS1 189 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 ZNF610Q8N9Z0 462 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 OR13A1Q8NGR1 328 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 MAP1LC3BQ9GZQ8 125 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 SEBOXQ9HB31 216 aaPredicted RBP19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 FZR1Q9UM11 496 aa19.31■□□□□ 0.68
RABGGTA-202ENST00000399409 H2BFWTQ7Z2G1 175 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 LRRC29Q8WV35 223 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 OR5H1A6NKK0 313 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 BRWD1-AS2P59051 145 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 SSX7Q7RTT5 188 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 FAM90A1Q86YD7 464 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 CA5BP1Q8WTZ4 195 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 METRNQ9UJH8 293 aa19.3■□□□□ 0.68
RABGGTA-202ENST00000399409 TNFSF13O75888 250 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 CGAP01215 116 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 MBP02144 154 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 WT1P19544 449 aaPredicted RBP19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 ELOBQ15370 118 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 RBMS3Q6XE24 437 aaKnown RBP19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 DTD1Q8TEA8 209 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 STARD4Q96DR4 205 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 SLC39A9Q9NUM3 307 aa19.29■□□□□ 0.68
RABGGTA-202ENST00000399409 SPAARA0A1B0GVQ0 90 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 PRDX2P32119 198 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 SSTR5P35346 364 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 RPS10P46783 165 aaKnown RBP19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 ELLP55199 621 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 KIAA2026Q5HYC2 2103 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 FAM53AQ6NSI3 398 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 BTNL3Q6UXE8 466 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 CD177Q8N6Q3 437 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 EDARADDQ8WWZ3 215 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 C15orf65H3BRN8 121 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 FGF8P55075 233 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 IGF2-ASQ6U949 168 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 BEND4Q6ZU67 534 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 OR10P1Q8NGE3 313 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 OPN3Q9H1Y3 402 aaPredicted RBP19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 TMEM242Q9NWH2 141 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 CLN8Q9UBY8 286 aa19.28■□□□□ 0.68
RABGGTA-202ENST00000399409 GALR2O43603 387 aaPredicted RBP19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 LY86O95711 162 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 TFF1P04155 84 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 DKK4Q9UBT3 224 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 PMS2P5A8MQ11 134 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 GZMHP20718 246 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 PPP1R35Q8TAP8 253 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 Q8WTZ3 238 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 LHX4Q969G2 390 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 PSG11Q9UQ72 335 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 SLC25A15Q9Y619 301 aa19.27■□□□□ 0.68
RABGGTA-202ENST00000399409 CEACAM4O75871 244 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 HOXA4Q00056 320 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 Q3ZCU0 254 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 MBD3L4A6NDZ8 208 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 MBD3L3A6NE82 208 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 MBD3L5A6NJ08 208 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 CEBPZOSA8MTT3 80 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 NQO2P16083 231 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 CFHR2P36980 270 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 DEFB109BQ30KR1 87 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 TPRX1Q8N7U7 411 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 MBD3L2Q8NHZ7 208 aaPredicted RBP19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 AGMATQ9BSE5 352 aa19.26■□□□□ 0.67
RABGGTA-202ENST00000399409 IGHV3-43A0A0B4J1X8 118 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 LINC00473A8K010 186 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 SRRM5B3KS81 715 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 ZG16O60844 167 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 ZNF737O75373 536 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms