RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 TSPAN2O60636 221 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 NKX2-2O95096 273 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 GCGP01275 180 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 EFNB2P52799 333 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 IFITM3Q01628 133 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 ACSF3Q4G176 576 aaPredicted RBP8.11□□□□□ -1.11
ATL3-201ENST00000398868 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
ATL3-201ENST00000398868 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 COL6A6A6NMZ7 2263 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 ARRDC5A6NEK1 342 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 H0YL77 283 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 MRPL30Q8TCC3 161 aaKnown RBP8.11□□□□□ -1.11
ATL3-201ENST00000398868 PIMREGQ9BSJ6 248 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 OR2H1Q9GZK4 316 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
ATL3-201ENST00000398868 TLNRD1Q9H1K6 362 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 THADAQ6YHU6 1953 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 OR4C45A6NMZ5 311 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 ATP6V0CP27449 155 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PSG6Q00889 435 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 DOLPP1Q86YN1 238 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 COX14Q96I36 57 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 P2RY1P47900 373 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 ZNF79Q15937 498 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 STPG2Q8N412 459 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 RPS4Y2Q8TD47 263 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 IL36RNQ9UBH0 155 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 RALGAPA1Q6GYQ0 2036 aa8.11□□□□□ -1.11
ATL3-201ENST00000398868 IGSF23A1L1A6 192 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 KLF4O43474 513 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 PSG2P11465 335 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 FCARP24071 287 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 CD24P25063 80 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 CTSSP25774 331 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 C16orf92Q96LL3 132 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 RGPD3A6NKT7 1758 aaPredicted RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 NHSL1Q5SYE7 1610 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 IGHV1-45A0A0A0MS14 117 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 A0A1B0GV72 72 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 UBE2L6O14933 153 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 MOSPD3O75425 235 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 BIVMQ86UB2 503 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 CXorf51AA0A1B0GTR3 108 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 LIPT2A6NK58 231 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 C21orf140B9A014 251 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 CELA3AP09093 270 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 FAM27E3Q08E93 113 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 PTP4A1Q93096 173 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 IGKV1D-16P01601 117 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 SUMO3P55854 103 aaPredicted RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 SYNGR2O43760 224 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 THYN1Q9P016 225 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 PP6455Q8WZ26 134 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
ATL3-201ENST00000398868 GSN-AS1Q9NRJ2 163 aa8.1□□□□□ -1.11
ATL3-201ENST00000398868 ABHD17AQ96GS6 310 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 IL20Q9NYY1 176 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
ATL3-201ENST00000398868 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 PILRBQ9UKJ0 227 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 A0A0J9YW62 118 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 CD160O95971 181 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 TEX30Q5JUR7 227 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 FAM74A4Q5TZK3 123 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 KBTBD11O94819 623 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 HIST1H1BP16401 226 aaKnown RBP8.09□□□□□ -1.11
ATL3-201ENST00000398868 FGF9P31371 208 aaPredicted RBP8.09□□□□□ -1.11
ATL3-201ENST00000398868 TMEM50BP56557 158 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 C10orf113Q5VZT2 155 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 C10orf111Q8N326 155 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 ZNF275Q9NSD4 429 aaPredicted RBP8.09□□□□□ -1.11
ATL3-201ENST00000398868 PDE6DO43924 150 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 CDS2O95674 445 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 ZNF735P0CB33 412 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 LHX2P50458 406 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 DEFB121Q5J5C9 76 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 FAM169BQ8N8A8 192 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 TMEM167BQ9NRX6 74 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
ATL3-201ENST00000398868 GAPDHP04406 335 aaKnown RBP8.09□□□□□ -1.11
ATL3-201ENST00000398868 TRGC1P0CF51 173 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms