RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ACY3Q96HD9 319 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 P2RX4Q99571 388 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SAMD10Q9BYL1 202 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 WNT5BQ9H1J7 359 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ZDHHC11Q9H8X9 412 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 TRAV38-1A0A0B4J264 116 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 KIR2DS1A0A191URI9 304 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SERPINA7P05543 415 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 CBLN1P23435 193 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 KIR2DS4P43632 304 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ATP5G3P48201 142 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 LINC00205P59089 165 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 KIR2DS1Q14954 304 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ACOT6Q3I5F7 207 aaPredicted RBP8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 RHBDD2Q6NTF9 364 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ZNF709Q8N972 641 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 CPEB3Q8NE35 698 aaKnown RBP8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ABHD3Q8WU67 409 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 HSPB9Q9BQS6 159 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 AP5S1Q9NUS5 200 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 TMEM38BQ9NVV0 291 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 CHCHD2Q9Y6H1 151 aaPredicted RBP8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 DOCK10Q96BY6 2186 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 PIAS2O75928 621 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 G6PCP35575 357 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 CDKN1AP38936 164 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 EDDM3BP56851 147 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 TRA2AQ13595 282 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SPATA46Q5T0L3 261 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 C1orf194Q5T5A4 169 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 MRPL21Q7Z2W9 205 aaKnown RBP8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 SLC25A45Q8N413 288 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ZNF114Q8NC26 417 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 OR2H1Q9GZK4 316 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 OR2W1Q9Y3N9 320 aa8.37□□□□□ -1.07
PTCHD4-202ENST00000398738 ZIC3O60481 467 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 NGFP01138 241 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 NPPCP23582 126 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 CD27P26842 260 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 OR10J1P30954 320 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 CCKARP32238 428 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 KRTDAPP60985 99 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 PPP1CBP62140 327 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 RAC1P63000 192 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 OR8B8Q15620 311 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 CMTM2Q8TAZ6 248 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 DNASE2BQ8WZ79 361 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 OPN3Q9H1Y3 402 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 ATP23Q9Y6H3 246 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 ETV2O00321 342 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 SLC35B1P78383 322 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 SERF2P84101 59 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 HOXA4Q00056 320 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 FGF23Q9GZV9 251 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 ZNF552Q9H707 407 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 TRAPPC2LQ9UL33 140 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 DMDP11532 3685 aa8.36□□□□□ -1.07
PTCHD4-202ENST00000398738 F2Z2F3 143 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 FRMD6-AS1P0C7T7 363 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 HOXA6P31267 233 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 PCSK4Q6UW60 755 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 Q6ZVH6 145 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 TDHQ8IZJ6 230 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 PINX1Q96BK5 328 aaKnown RBP8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 NEIL1Q96FI4 390 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 RARRES3Q9UL19 164 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 DNAJC13O75165 2243 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 A0A0G2JMM0 328 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 LOC102725191A0A1B0GVB3 256 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 A0A1W2PPB8 328 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 A0A1W2PR77 199 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 A0A1W2PRS3 328 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 KIR3DP1A8MWS1 328 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 SLC17A3O00476 420 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 VAMP5O95183 116 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 RAB4AP20338 218 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 CEACAM6P40199 344 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 FOXG1P55316 489 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 TGIF2LYQ8IUE0 185 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 FGFRL1Q8N441 504 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 IFI44Q8TCB0 444 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 WFDC12Q8WWY7 111 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 PYGO2Q9BRQ0 406 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 WDFY4Q6ZS81 3184 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 RAMP3O60896 148 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 RHBDL1O75783 438 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 LTC4SQ16873 150 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 ASCL4Q6XD76 172 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 GSX1Q9H4S2 264 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-202ENST00000398738 AQP7O14520 342 aa8.34□□□□□ -1.07
PTCHD4-202ENST00000398738 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms