RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MRGPRDQ8TDS7 321 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 SPSB4Q96A44 273 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 MTCH1Q9NZJ7 389 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 H0Y980 276 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 ZNF737O75373 536 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 NDUFB8O95169 186 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 CER1O95813 267 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 CEACAM8P31997 349 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 TMEM41BQ5BJD5 291 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 C20orf204Q6ZNR8 217 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 ZNF295-AS1Q8N0V1 137 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 GPR146Q96CH1 333 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 ZNF488Q96MN9 340 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 VSIRQ9H7M9 311 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 FREM1Q5H8C1 2179 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 Q6ZWC4 215 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 MANBALQ9NQG1 85 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 PXMP4Q9Y6I8 212 aa13.55□□□□□ -0.24
CHMP1A-201ENST00000397901 KIR2DS1A0A191URI9 304 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 TMEM250H0YL14 139 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 HS3ST1O14792 307 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 SYNGR1O43759 233 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 IAPPP10997 89 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 PSG2P11465 335 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 GCH1P30793 250 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 KIR2DS4P43632 304 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 MEF2BQ02080 365 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 UBE2V1Q13404 147 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 WDYHV1Q96HA8 205 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 ALKBH7Q9BT30 221 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 PRDM14Q9GZV8 571 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 ATP23Q9Y6H3 246 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 A0A1B0GUS0 222 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 C5orf49A4QMS7 147 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A22PA8MWA6 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 TRAPPC2LH3BP13 241 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 OR5G3P0C626 314 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 F2RP25116 425 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 MMDQ15546 238 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 ZDHHC23Q8IYP9 409 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 Q8NFD4 153 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 OR2Y1Q8NGV0 311 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 RDH5Q92781 318 aa13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-201ENST00000397901 SERPINE2P07093 398 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 IL3RAP26951 378 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 MDH2P40926 338 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 MRPL21Q7Z2W9 205 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 STPG4Q8N801 248 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 SYNGR4O95473 234 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 TOMM40O96008 361 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 PPBPP02775 128 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 ARF1P84077 181 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 Q6ZRM9 215 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 MRPL30Q8TCC3 161 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 SGCZQ96LD1 299 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 PARLQ9H300 379 aa13.53□□□□□ -0.24
CHMP1A-201ENST00000397901 GYPAP02724 150 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 CD33P20138 364 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 GDF1P27539 372 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 OTX2P32243 289 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 FOLR3P41439 243 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 SRYQ05066 204 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 OR8G2PQ6IF36 304 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 COLCA1Q6ZS62 124 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 MKXQ8IYA7 352 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 OR1L6Q8NGR2 347 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 DEPPQ9NTK1 212 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 ERRFI1Q9UJM3 462 aaPredicted RBP13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms