RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CYB5R2Q6BCY4 276 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 JMJD1CQ15652 2540 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 J3QR89 54 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PHF1O43189 567 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 LIPFP07098 398 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TOR2AQ5JU69 321 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 DTX2Q86UW9 622 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 RNF2Q99496 336 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 LEUTXA8MZ59 168 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 PGLYRP1O75594 196 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 RTN4RL2Q86UN3 420 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 HES7Q9BYE0 225 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ZMAT5Q9UDW3 170 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 IGKV1-6A0A0C4DH72 117 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 HSPB1P04792 205 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 C1QTNF9P0C862 333 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 PSG2P11465 335 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 OMGP23515 440 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 AKR1C2P52895 323 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 NKX2-5P52952 324 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 FAM209BQ5JX69 171 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ABHD17AQ96GS6 310 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 CYTL1Q9NRR1 136 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 GFOD1Q9NXC2 390 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 FBXL17Q9UF56 701 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 FHITP49789 147 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 GNB2P62879 340 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 OR8H3Q8N146 312 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ATP5SQ99766 215 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 SIRT7Q9NRC8 400 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 UFSP2Q9NUQ7 469 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 PPP1R3CQ9UQK1 317 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 HERPUD1Q15011 391 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 NANPQ8TBE9 248 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 RPUSD4Q96CM3 377 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 PRRC2AP48634 2157 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 IGKV1D-8A0A087WSZ0 117 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 DLK1P80370 383 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 FLI1Q01543 452 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 DMRTA1Q5VZB9 504 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 OR51H1Q8NH63 302 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 RDH5Q92781 318 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 SDCBPO00560 298 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 APOBEC3AP31941 199 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 GABRA2P47869 451 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ERVK-16P61578 105 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 SLC25A48Q6ZT89 311 aaKnown RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 PLSCR3Q9NRY6 295 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 BET1LQ9NYM9 111 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ERRFI1Q9UJM3 462 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF580Q9UK33 172 aa4.91□□□□□ -1.62
PTPRD-206ENST00000397617 C15orf65H3BRN8 121 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 USF1P22415 310 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-206ENST00000397617 OR3A1P47881 315 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 FAAP20Q6NZ36 180 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 BTNL8Q6UX41 500 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 RBMS3Q6XE24 437 aaKnown RBP4.9□□□□□ -1.62
PTPRD-206ENST00000397617 KIR3DL3Q8N743 410 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 OR5AN1Q8NGI8 311 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 RHOVQ96L33 236 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 REG4Q9BYZ8 158 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 GNG12Q9UBI6 72 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 ITPR1Q14643 2758 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 EEF1E1-BLOC1S5C9J1V9 151 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 DUTP33316 252 aaKnown RBP4.9□□□□□ -1.62
PTPRD-206ENST00000397617 RNF212Q495C1 297 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 ALKBH2Q6NS38 261 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 VASH2Q86V25 355 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 SECTM1Q8WVN6 248 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 OR10C1Q96KK4 312 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM147Q9BVK8 224 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 TP53TG5Q9Y2B4 290 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 A0A087WWC5 75 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 ZSCAN5BA6NJL1 495 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 C1orf196B1AJZ1 125 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 LYZL6O75951 148 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 FABP1P07148 127 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 SLC35E3Q7Z769 313 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 TBC1D26Q86UD7 250 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 NPRL2Q8WTW4 380 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 SCNM1Q9BWG6 230 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 UQCC1Q9NVA1 299 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 TINAGQ9UJW2 476 aa4.9□□□□□ -1.62
PTPRD-206ENST00000397617 SEC14L6B5MCN3 397 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SYNGR1O43759 233 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 VENTXO95231 258 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 F10P00742 488 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 KLK9Q2XQG4 91 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 CXorf67Q86X51 503 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SLC35G3Q8N808 338 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 DTX3Q8N9I9 347 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 RBM14Q96PK6 669 aaKnown RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 KLK9Q9UKQ9 250 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 ADAP1O75689 374 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 ARG1P05089 322 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 CD3EP07766 207 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms