RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
CCDC40-204ENST00000397545 HFEQ30201 348 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 LRRC10Q5BKY1 277 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF385CQ66K41 422 aaPredicted RBP9.27□□□□□ -0.93
CCDC40-204ENST00000397545 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 ELOVL1Q9BW60 279 aa9.27□□□□□ -0.93
CCDC40-204ENST00000397545 TECRQ9NZ01 308 aaKnown RBP9.27□□□□□ -0.93
CCDC40-204ENST00000397545 MKRN2OSH3BPM6 223 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 HTR1DP28221 377 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 WNT5AP41221 380 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 FGF12P61328 243 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 PRSS3P2Q8NHM4 247 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 Q96M66 194 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 OR6C3Q9NZP0 311 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 LOC102724200A0A096LPH7 203 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-204ENST00000397545 PGLYRP1O75594 196 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-204ENST00000397545 USF1P22415 310 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-204ENST00000397545 NPY1RP25929 384 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 TCTEX1D1Q8N7M0 179 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 OR5AU1Q8NGC0 362 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 STARD4Q96DR4 205 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 HELTA6NFD8 242 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 LYPD3O95274 346 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 IGLV3-21P80748 117 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-204ENST00000397545 SRSF3P84103 164 aaKnown RBP9.26□□□□□ -0.93
CCDC40-204ENST00000397545 FBXW9Q5XUX1 488 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 FGFRL1Q8N441 504 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 OR1B1Q8NGR6 318 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 OR1L1Q8NH94 360 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 HES7Q9BYE0 225 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
CCDC40-204ENST00000397545 A0A1W2PQM1 296 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 DNASE2O00115 360 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 GZMHP20718 246 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 NHLH1Q02575 133 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 CEACAM21Q3KPI0 293 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 DCAF10Q5QP82 559 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF837Q96EG3 531 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 GFI1Q99684 422 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 TRAV38-1A0A0B4J264 116 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 GDF9O60383 454 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 OR5AL1P0C617 328 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 DANCRP0C864 163 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 S100A7P31151 101 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 RAB7AP51149 207 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 LYZP61626 148 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 PKIAP61925 76 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 OR2D3Q8NGH3 330 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 hADV38S2A0JD32 116 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 SERF2P84101 59 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF818PQ6ZRF7 136 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 RPEQ96AT9 228 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 WASHC3Q9Y3C0 194 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 M0R2Z0 102 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 NEURL1O76050 574 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 CLDN14O95500 239 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 CYB5R3P00387 301 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 HBZP02008 142 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 NAT2P11245 290 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 CD1BP29016 333 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 HOXA6P31267 233 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 CCKARP32238 428 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF137PP52743 207 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 TCTAP57738 103 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 SPCS3P61009 180 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 GNB2P62879 340 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ETFRF1Q6IPR1 90 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 GFRALQ6UXV0 394 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 TAF15Q92804 592 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 RAB24Q969Q5 203 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 FLYWCH2Q96CP2 140 aaKnown RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 SPSB2Q99619 263 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 NDFIP1Q9BT67 221 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF71Q9NQZ8 489 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-204ENST00000397545 DLL3Q9NYJ7 618 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 NPTNQ9Y639 398 aa9.25□□□□□ -0.93
CCDC40-204ENST00000397545 ZNF407Q9C0G0 2248 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 H0YIZ8 118 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 OR2H2O95918 312 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 PLAUP00749 431 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 TMEM187Q14656 261 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 TRIP6Q15654 476 aaKnown RBP9.24□□□□□ -0.93
CCDC40-204ENST00000397545 TNXAQ16473 311 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 TMEM251Q8N6I4 163 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 FAM216AQ8WUB2 273 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 SRXN1Q9BYN0 137 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 HEXA-AS1Q9H8Q6 139 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 USF3Q68DE3 2245 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 HEATR5AQ86XA9 2040 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
CCDC40-204ENST00000397545 TRGC1P0CF51 173 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
CCDC40-204ENST00000397545 SELENOHQ8IZQ5 122 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms