RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 FSCN3Q9NQT6 498 aa7.61□□□□□ -1.19
MSH5-205ENST00000395853 KCNIP1Q9NZI2 227 aa7.61□□□□□ -1.19
MSH5-205ENST00000395853 KCNE3Q9Y6H6 103 aa7.61□□□□□ -1.19
MSH5-205ENST00000395853 TDRD6O60522 2096 aaKnown RBP7.61□□□□□ -1.19
MSH5-205ENST00000395853 GON4LQ3T8J9 2241 aa7.61□□□□□ -1.19
MSH5-205ENST00000395853 RIIAD1A6NNX1 92 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 AGFG2O95081 481 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 NTN1O95631 604 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 CELA3BP08861 270 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 IGLL1P15814 213 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 FRKP42685 505 aaPredicted RBP7.6□□□□□ -1.19
MSH5-205ENST00000395853 RPL23P62829 140 aaKnown RBP7.6□□□□□ -1.19
MSH5-205ENST00000395853 ARF1P84077 181 aaKnown RBP7.6□□□□□ -1.19
MSH5-205ENST00000395853 CPEB2Q7Z5Q1 589 aaKnown RBP7.6□□□□□ -1.19
MSH5-205ENST00000395853 FAM174AQ8TBP5 190 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 GLIPR2Q9H4G4 154 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.6□□□□□ -1.19
MSH5-205ENST00000395853 ZZEF1O43149 2961 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 HMGN4O00479 90 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 CDC42EP2O14613 210 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 NRASP01111 189 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 LHX2P50458 406 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 RELBQ01201 579 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 ALG10Q5BKT4 473 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 FAM78BQ5VT40 261 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 Q6ZSR6 202 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 ZNF595Q8IYB9 648 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 ARHGEF39Q8N4T4 335 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 NEUROG1Q92886 237 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 NINJ1Q92982 152 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 SCGB3A2Q96PL1 93 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 FBLN5Q9UBX5 448 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 IER3IP1Q9Y5U9 82 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
MSH5-205ENST00000395853 TRAV1-1A0A0B4J248 108 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 LRRC3CA6NJW4 275 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 SLC17A2O00624 439 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 SCGB2A1O75556 95 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 KRASP01116 189 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 GYPBP06028 91 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 NANOS3P60323 173 aaKnown RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 Q0VG73 95 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 ABHD17CQ6PCB6 329 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 TRAPPC6BQ86SZ2 158 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 OR2I1PQ8NGU4 316 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 RTN4IP1Q8WWV3 396 aaPredicted RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 PNRC2Q9NPJ4 139 aaKnown RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 SPEGQ15772 3267 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 NSG1A0A0A6YYJ2 146 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 C9orf118A6NHY6 69 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 PLPP3O14495 311 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 IGLV3-19P01714 112 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 LINC00869P0C866 280 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 SLC25A6P12236 298 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 HIST1H1TP22492 207 aaPredicted RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 PPP1CBP62140 327 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 IGFBP7Q16270 282 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 HMGN2P46Q86SG4 172 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 SFTPA2Q8IWL1 248 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 DEFB119Q8N690 84 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 CSNK1A1LQ8N752 337 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 GVQW1Q8N7I0 195 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 C1orf162Q8NEQ5 155 aaPredicted RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 OR2M3Q8NG83 312 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 STRADBQ9C0K7 418 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 MS4A5Q9H3V2 200 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 BANF2Q9H503 90 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 C1orf123Q9NWV4 160 aa7.59□□□□□ -1.19
MSH5-205ENST00000395853 WSB2Q9NYS7 404 aaPredicted RBP7.59□□□□□ -1.19
MSH5-205ENST00000395853 ACACAQ13085 2346 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 MEGF11A6BM72 1044 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 P2RY10O00398 339 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 TNFSF14O43557 240 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 KBTBD11O94819 623 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 UTS2O95399 124 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 EPPINO95925 133 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 REG1AP05451 166 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 MDH2P40926 338 aaKnown RBP7.58□□□□□ -1.2
MSH5-205ENST00000395853 NCBP2P52298 156 aaKnown RBP eCLIP7.58□□□□□ -1.28e-6■■□□□ 13
MSH5-205ENST00000395853 TGFBR3Q03167 851 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 PRICKLE4Q2TBC4 344 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 TMEM42Q69YG0 159 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 C19orf35Q6ZS72 473 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 PATE1Q8WXA2 126 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 DIO2Q92813 273 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 CNRIP1Q96F85 164 aaPredicted RBP7.58□□□□□ -1.2
MSH5-205ENST00000395853 GCM1Q9NP62 436 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 LRP4O75096 1905 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 TRBV5-5A0A0J9YX44 114 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 CEACAM18A8MTB9 384 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 METTL12A8MUP2 240 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 H0YJW9 148 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 MLNRO43193 412 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 ABHD16AO95870 558 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 PSG2P11465 335 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 IGFBP2P18065 325 aa7.58□□□□□ -1.2
MSH5-205ENST00000395853 PI3P19957 117 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms