RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CTSBP07858 339 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 SMUG1Q53HV7 270 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 MUC15Q8N387 334 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 OR5AU1Q8NGC0 362 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 OR4B1Q8NGF8 309 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 RAX2Q96IS3 184 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 SYNGR3O43761 229 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 MAS1LP35410 378 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 MFAP4P55083 255 aa8.95□□□□□ -0.98
COL4A6-203ENST00000394872 HSD17B13Q7Z5P4 300 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-203ENST00000394872 SLC25A17O43808 307 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 OR52M1Q8NGK5 317 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 OR1N2Q8NGR9 330 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 OR4C12Q96R67 309 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 RBKSQ9H477 322 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 COL4A5P29400 1685 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 ODAMA1E959 279 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 H3BVH4 76 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 LINC00869P0C866 280 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 FSTP19883 344 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 FCGR2BP31994 310 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 LEAP2Q969E1 77 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 MRPS18AQ9NVS2 196 aaKnown RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 PLAUP00749 431 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 A0A087X0M5 115 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 A0A1B0GX30 115 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 DCAF12L2Q5VW00 463 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 RTN4RQ9BZR6 473 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 PKIBQ9C010 78 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 KCNK7Q9Y2U2 307 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 FOXH1O75593 365 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 LIMS1P48059 325 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 DPH3Q96FX2 82 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 B9A039 149 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 WISP3O95389 354 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 LIPFP07098 398 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 RCC1P18754 421 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 RELBQ01201 579 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 WDFY1Q8IWB7 410 aa8.94□□□□□ -0.98
COL4A6-203ENST00000394872 SIRT4Q9Y6E7 314 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-203ENST00000394872 COL11A1P12107 1806 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 FAM74A7A6NL05 159 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 GREM1O60565 184 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 MMP9P14780 707 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 ZNF25P17030 456 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 FAM53AQ6NSI3 398 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 A0A1W2PP11 408 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 LMX1BO60663 402 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 TIAF1O95411 115 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 SEC11BP0C7V7 166 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 DLL3Q9NYJ7 618 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 ARFGEF1Q9Y6D6 1849 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 IGKV3D-11A0A0A0MRZ8 115 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 THY1P04216 161 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 IGKV3-11P04433 115 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 CD1AP06126 327 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 HOXA6P31267 233 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 PNKDQ8N490 385 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 C9orf62Q8N4C0 152 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 LHFPL6Q9Y693 200 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 DSPPQ9NZW4 1301 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 REG1AP05451 166 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 GCSHP23434 173 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 SULT1A2P50226 295 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 FUT5Q11128 374 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 CXorf66Q5JRM2 361 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 AMELYQ99218 206 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 CLEC7AQ9BXN2 247 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 KIF13BQ9NQT8 1826 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 ZNF324O75467 553 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 PRSS53Q2L4Q9 553 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 ACSF3Q4G176 576 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 PACRGQ96M98 296 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 TBX15Q96SF7 602 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 TIMP4Q99727 224 aa8.93□□□□□ -0.98
COL4A6-203ENST00000394872 FOXD3Q9UJU5 478 aaPredicted RBP8.93□□□□□ -0.98
COL4A6-203ENST00000394872 IGLV1-36A0A0B4J1U3 117 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 C7orf77A4D0Y5 90 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 LBHQ53QV2 105 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 RALYQ9UKM9 306 aaKnown RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 APOBEC3AP31941 199 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 VAX1Q5SQQ9 334 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 ZNF343Q6P1L6 599 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 ZNF430Q9H8G1 570 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 TNS1Q9HBL0 1735 aaKnown RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 A0A1W2PR77 199 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 C4orf51C9J302 202 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 SSTR5P35346 364 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 FAM209AQ5JX71 171 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 TRAV30A0A087WSZ9 112 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 SIAH2O43255 324 aa8.92□□□□□ -0.98
COL4A6-203ENST00000394872 PGLYRP1O75594 196 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-203ENST00000394872 RPLP1P05386 114 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms