RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 LYZL4Q96KX0 146 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 SEC16AO15027 2179 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 IGLV3-12A0A075B6K2 115 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 LRRC30A6NM36 301 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 PPIHO43447 177 aaKnown RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 COX7A2P2O60397 106 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 CA6P23280 308 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 CHRNB4P30926 498 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 SPEM1Q8N4L4 309 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF596Q8TC21 504 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 LINC00470Q9BZP3 86 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 OR2J1Q9GZK6 312 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 GLRX2Q9NS18 164 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 TCF20Q9UGU0 1960 aaKnown RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 IGKV1D-8A0A087WSZ0 117 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 ETV2O00321 342 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 TNFSF10P50591 281 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 OR1C1Q15619 314 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 AARDQ4LEZ3 155 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 FAM90A2PQ658T7 463 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 ETFRF1Q6IPR1 90 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 RNASEKQ6P5S7 137 aaKnown RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 OR2Y1Q8NGV0 311 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 COMMD5Q9GZQ3 224 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 DLL3Q9NYJ7 618 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 PRNDQ9UKY0 176 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 RNF24Q9Y225 148 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 SHISA7A6NL88 538 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 B4E171 279 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 FCGR3BO75015 233 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 OTX1P32242 354 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 TSPAN7P41732 249 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 MLF1P58340 268 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 RELQ04864 619 aaPredicted RBP7.37□□□□□ -1.23
GABRA1-202ENST00000393943 GAGE1Q13065 139 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 FOXL2NBQ6ZUU3 175 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 C1QTNF5Q9BXJ0 243 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 WNT5BQ9H1J7 359 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 CXXC4Q9H2H0 198 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
GABRA1-202ENST00000393943 NKX6-3A6NJ46 265 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 TYMSP04818 313 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 G6PCP35575 357 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 EDDM3AQ14507 147 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 HIST3H3Q16695 136 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 WIPI1Q5MNZ9 446 aaPredicted RBP7.36□□□□□ -1.23
GABRA1-202ENST00000393943 DCAF10Q5QP82 559 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 GFI1BQ5VTD9 330 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 LYPD6Q86Y78 171 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ABHD14AQ9BUJ0 271 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 GAL3ST2Q9H3Q3 398 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 PNRC2Q9NPJ4 139 aaKnown RBP7.36□□□□□ -1.23
GABRA1-202ENST00000393943 DENND4AQ7Z401 1863 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 SOX8P57073 446 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CCL7P80098 99 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 COA6Q5JTJ3 125 aaKnown RBP7.36□□□□□ -1.23
GABRA1-202ENST00000393943 SFTPA2Q8IWL1 248 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 OR1K1Q8NGR3 316 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 IFI44Q8TCB0 444 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 THOC3Q96J01 351 aaKnown RBP7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ELOVL1Q9BW60 279 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CLN8Q9UBY8 286 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 PSG11Q9UQ72 335 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 HS3ST3B1Q9Y662 390 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 A6NDN8 102 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 AQP7O14520 342 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CRYAAP02489 173 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 NPY1RP25929 384 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 OPRK1P41145 380 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ARG2P78540 354 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 LTC4SQ16873 150 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF319Q9P2F9 582 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 SCN5AQ14524 2016 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 LINC01565O15544 149 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 OR10J4P0C629 311 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 PATE4P0C8F1 98 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CCL3P10147 92 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CRYGSP22914 178 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 CASP6P55212 293 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF766Q5HY98 468 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 ZNF664Q8N3J9 261 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 C20orf144Q9BQM9 153 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 MAP1LC3CQ9BXW4 147 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 PRDM13Q9H4Q3 707 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 LY96Q9Y6Y9 160 aa7.36□□□□□ -1.23
GABRA1-202ENST00000393943 GON4LQ3T8J9 2241 aa7.35□□□□□ -1.23
GABRA1-202ENST00000393943 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
GABRA1-202ENST00000393943 KLF3P57682 345 aaPredicted RBP7.35□□□□□ -1.23
GABRA1-202ENST00000393943 SAPCD1Q5SSQ6 148 aa7.35□□□□□ -1.23
GABRA1-202ENST00000393943 TMEM42Q69YG0 159 aa7.35□□□□□ -1.23
GABRA1-202ENST00000393943 MMD2Q8IY49 270 aa7.35□□□□□ -1.23
GABRA1-202ENST00000393943 OR4P4Q8NGL7 312 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms