RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PGLYRP1O75594 196 aaPredicted RBP8.18□□□□□ -1.1
COL6A3-204ENST00000392003 RHBDL1O75783 438 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 CD5P06127 495 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 MMP9P14780 707 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 F2RP25116 425 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 GUK1Q16774 197 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 OR8G2PQ6IF36 304 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 PRSS57Q6UWY2 283 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 LFNGQ8NES3 379 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 OR1J1Q8NGS3 322 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 OR2G3Q8NGZ4 309 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 NOL4LQ96MY1 436 aaPredicted RBP8.18□□□□□ -1.1
COL6A3-204ENST00000392003 OR2J1Q9GZK6 312 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 IL19Q9UHD0 177 aa8.18□□□□□ -1.1
COL6A3-204ENST00000392003 YLPM1P49750 1951 aaKnown RBP8.18□□□□□ -1.1
COL6A3-204ENST00000392003 ATXN7O15265 892 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 LYZL6O75951 148 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 OR4A8P0C604 315 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 ASCL1P50553 236 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 RPL23AP62750 156 aaKnown RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 CXorf66Q5JRM2 361 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 INO80CQ6PI98 192 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 TMEM252Q8N6L7 170 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 OR5T1Q8NG75 326 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 FAM216AQ8WUB2 273 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 OR5H1A6NKK0 313 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 PITX3O75364 302 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 APC2O95996 2303 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 GRPP07492 148 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 WT1P19544 449 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 IGF2-ASQ6U949 168 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 H1FOOQ8IZA3 346 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 SCCPDHQ8NBX0 429 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 AKR1E2Q96JD6 320 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 LYRM2Q9NU23 88 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 KCNIP1Q9NZI2 227 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 SLC33A1O00400 549 aaPredicted RBP8.17□□□□□ -1.1
COL6A3-204ENST00000392003 PPBPP02775 128 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 SNCAP37840 140 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 BAXQ07812 192 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 GABRA6Q16445 453 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 TEX38Q6PEX7 206 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 SLC25A40Q8TBP6 338 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 MSL2Q9HCI7 577 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 OBP2BQ9NPH6 170 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
COL6A3-204ENST00000392003 IGSF23A1L1A6 192 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 CST7O76096 145 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 NXPH3O95157 252 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 BRS3P32247 399 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 ZNF324BQ6AW86 544 aaPredicted RBP8.16□□□□□ -1.1
COL6A3-204ENST00000392003 PCSK4Q6UW60 755 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 FAM214BQ7L5A3 538 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 TMEM217Q8N7C4 229 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 OR5C1Q8NGR4 320 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 GNPNAT1Q96EK6 184 aaPredicted RBP8.16□□□□□ -1.1
COL6A3-204ENST00000392003 CABLES2Q9BTV7 478 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 SH3BGRL3Q9H299 93 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 MMP24Q9Y5R2 645 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 IFNL4K9M1U5 179 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 CDIPTO14735 213 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 CHST1O43916 411 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 OR2H2O95918 312 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 IFNA5P01569 189 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 IFNA17P01571 189 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 CELA3BP08861 270 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 IGHV1-2P23083 117 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 NMSQ5H8A3 153 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 FAM180AQ6UWF9 173 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 KCNJ16Q9NPI9 418 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 TAAR3PQ9P1P4 343 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 A0A1B0GU03 582 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 A0A1B0GV50 99 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 C20orf202A1L168 122 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 M0R036 132 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 UCP2P55851 309 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 ID3Q02535 119 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 ZNF880Q6PDB4 577 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 LRFN3Q9BTN0 628 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 PPP1R3CQ9UQK1 317 aa8.16□□□□□ -1.1
COL6A3-204ENST00000392003 TRAV39A0A0B4J263 110 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 ZNF320A2RRD8 509 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 CLEC18AA5D8T8 446 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 C1QL1O75973 258 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 DFFBO76075 338 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 PSG2P11465 335 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 FGF7P21781 194 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 DYNLT3P51808 116 aa8.15□□□□□ -1.1
COL6A3-204ENST00000392003 HNF4GQ14541 408 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms