RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 FAM157CP0CG43 387 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 UCP1P25874 307 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 NDFIP1Q9BT67 221 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 TREM2Q9NZC2 230 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 SPTA1P02549 2419 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 SRSF10O75494 262 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 CLDN14O95500 239 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 NRN1LQ496H8 165 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 BCL2L2Q92843 193 aaPredicted RBP13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 MESP1Q9BRJ9 268 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 J3QR06 171 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 RAB29O14966 203 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 TMEM11P17152 192 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 HNRNPA3P51991 378 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 HFEQ30201 348 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 OR8G5Q8NG78 346 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 MED12Q93074 2177 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 TGIF2-C20orf24A0A0A6YYL0 155 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 CEBPDP49716 269 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 EFNA2O43921 213 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF253O75346 499 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 ORM2P19652 201 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 P2RY6Q15077 328 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 SEBOXQ9HB31 216 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 DNAJC13O75165 2243 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 TIPARPQ7Z3E1 657 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 TXNDC17Q9BRA2 123 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 PXMP4Q9Y6I8 212 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 LOC102723996A0A087X1L8 192 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 MPV17P39210 176 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 TCL1AP56279 114 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF506Q5JVG8 444 aa13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 RNASEKQ6P5S7 137 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 PSMG3Q9BT73 122 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-201ENST00000389413 PRRX1P54821 245 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 HARBI1Q96MB7 349 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 ABHD14AQ9BUJ0 271 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 REPIN1Q9BWE0 567 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 OR51M1Q9H341 326 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 J3QW42 95 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 GLIPR1P48060 266 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 A0A1W2PPE3 182 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 NDUFB4O95168 129 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 UMODP07911 640 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 SRP14P37108 136 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 PLAURQ03405 335 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 HLA-DRB5Q30154 266 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 OR2T6Q8NHC8 308 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 METTL1Q9UBP6 276 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 ZMAT5Q9UDW3 170 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 PDPNQ86YL7 162 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 OR4F17Q8NGA8 305 aa13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 KLF14Q8TD94 323 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 FLYWCH2Q96CP2 140 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-201ENST00000389413 ANAPC1Q9H1A4 1944 aa13.77□□□□□ -0.2
PTPRN2-201ENST00000389413 CDX1P47902 265 aaPredicted RBP13.77□□□□□ -0.2
PTPRN2-201ENST00000389413 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF703Q9H7S9 590 aaPredicted RBP13.77□□□□□ -0.2
PTPRN2-201ENST00000389413 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.2
PTPRN2-201ENST00000389413 A0A0G2JMM0 328 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 A0A1W2PPB8 328 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 A0A1W2PRS3 328 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 KIR3DP1A8MWS1 328 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 GDF9O60383 454 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 TOX4O94842 621 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 CAMPP49913 170 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 OR5I1Q13606 314 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 RHOVQ96L33 236 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 REG4Q9BYZ8 158 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 SAP30LQ9HAJ7 183 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 G0S2P27469 103 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 OR1L8Q8NGR8 309 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 AAMDCQ9H7C9 122 aa13.77□□□□□ -0.21
PTPRN2-201ENST00000389413 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 PRR33A8MZF0 331 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 M0R143 59 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 ZG16O60844 167 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 SRSF3P84103 164 aaKnown RBP13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 TGIF1Q15583 401 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 PCGF1Q9BSM1 259 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 MARCH11A6NNE9 402 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 S1PR2O95136 353 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 IER3P46695 156 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 LHFPL1Q86WI0 220 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 OR5AU1Q8NGC0 362 aa13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 BARX1Q9HBU1 254 aaPredicted RBP13.76□□□□□ -0.21
PTPRN2-201ENST00000389413 ODAMA1E959 279 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms