RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SMCR5Q8TEV8 140 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 TMEM239Q8WW34 195 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 TRNT1Q96Q11 434 aaKnown RBP0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 HINT2Q9BX68 163 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 MED9Q9NWA0 146 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 COMMD9Q9P000 198 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 RABL2AQ9UBK7 228 aaPredicted RBP0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 HHLA3Q9XRX5 114 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 RBMX2Q9Y388 322 aaKnown RBP0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 IGKV3-7A0A075B6H7 116 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 IGHV3-64A0A075B6Q5 118 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 TRBV6-5A0A0K0K1A5 114 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 BHLHE40O14503 412 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 ZW10O43264 779 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 SYNGR1O43759 233 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 CDK14O94921 469 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 IGHV1-69P01742 117 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 UCHL1P09936 223 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 CCL2P13500 99 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 GPX2P18283 190 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 PPP1CCP36873 323 aaKnown RBP0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 DAPP51397 102 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 STC1P52823 247 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 RBM11P57052 281 aaKnown RBP0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 TAS2R45P59539 299 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 GLO1Q04760 184 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 XRCC4Q13426 336 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 EXOC3L4Q17RC7 722 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 TBC1D28Q2M2D7 210 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 TMEM249Q2WGJ8 235 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 HSP90B2PQ58FF3 399 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR10J3Q5JRS4 329 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 TMEM42Q69YG0 159 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 AHSA2Q719I0 299 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 DOLPP1Q86YN1 238 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR2D3Q8NGH3 330 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 FGF13Q92913 245 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 LRRC39Q96DD0 335 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 ACY3Q96HD9 319 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 ABHD14BQ96IU4 210 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 Q96M85 177 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 MIEN1Q9BRT3 115 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 MED28Q9H204 178 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 C8orf4Q9NR00 106 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 MRM2Q9UI43 246 aaKnown RBP0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 NPATQ14207 1427 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 GLI3P10071 1580 aa0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 CHD3Q12873 2000 aaKnown RBP0.26□□□□□ -2.37
RNU6-541P-201ENST00000384709 MDFIC2A0A1B0GVS7 189 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 EFCAB9A8MZ26 197 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 C9J4A7 227 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 H0YC42 278 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 M0QYV0 167 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 STK16O75716 305 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 PSMG1O95456 288 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 NQO2P16083 231 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 ORM2P19652 201 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 RPL27AP46776 148 aaKnown RBP0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 XIAPP98170 497 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 PLCXD2Q0VAA5 305 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 NNATQ16517 81 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 LGALS9BQ3B8N2 356 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 TNFAIP8L1Q8WVP5 186 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 CATSPER2Q96P56 530 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 ACBD6Q9BR61 282 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 GLS2Q9UI32 602 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 DNAJC12Q9UKB3 198 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 CNTRLQ7Z7A1 2325 aa0.25□□□□□ -2.37
RNU6-541P-201ENST00000384709 PLXNA4Q9HCM2 1894 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 FRAS1Q86XX4 4008 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 A0A1B0GW15 77 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 A0A1W2PQD3 144 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 RFPL4AA6NLU0 287 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 RFPL4AL1F8VTS6 287 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 ZNF737O75373 536 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 PGLYRP1O75594 196 aaPredicted RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 CIAO1O76071 339 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 LDOC1O95751 146 aaPredicted RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 FADS2O95864 444 aaKnown RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 NPYP01303 97 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 IVLP07476 585 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 LIMS3P0CW19 117 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 LIMS4P0CW20 117 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 IL9P15248 144 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR10J1P30954 320 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 RCVRNP35243 200 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 HSPA9P38646 679 aaKnown RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 AKR1C3P42330 323 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 SERPINB10P48595 397 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 EVX1P49640 407 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 CTBP2P56545 445 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 SNAP25P60880 206 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 DYNLL1P63167 89 aaKnown RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 HOXC5Q00444 222 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 SLC38A11Q08AI6 406 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 FLOT2Q14254 428 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 SLC35E3Q7Z769 313 aa0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 LRRC28Q86X40 367 aaPredicted RBP0.24□□□□□ -2.37
RNU6-541P-201ENST00000384709 LRRC6Q86X45 466 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms