RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TRIM64CA6NLI5 447 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 NCF1CA8MVU1 366 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 SEC14L6B5MCN3 397 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 GOLGA8NF8WBI6 632 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 H3BT86 120 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 M0R378 163 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 PSMD11O00231 422 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF593O00488 134 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 SDCBPO00560 298 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 GATCO43716 136 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CREBL2O60519 120 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CIB2O75838 187 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 PSMG1O95456 288 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 KLK1P06870 262 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 LGALS1P09382 135 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CD7P09564 240 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CCL5P13501 91 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 PMCHP20382 165 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CCNOP22674 350 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CD82P27701 267 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 BRS3P32247 399 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CA5AP35218 305 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CRATP43155 626 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 RPL28P46779 137 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 DNASE1L1P49184 302 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 SULT1A2P50226 295 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CDK9P50750 372 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF137PP52743 207 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 OR4D2P58180 307 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TAS2R45P59539 299 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ACTBP60709 375 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 FGF12P61328 243 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 HIST1H4AP62805 103 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ACTG1P63261 375 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 PRDX1Q06830 199 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 DYNC1I2Q13409 638 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 PAFAH1B3Q15102 231 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 USF2Q15853 346 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CDC37Q16543 378 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ATP6V1FQ16864 119 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 C9orf64Q5T6V5 341 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ARMC12Q5T9G4 340 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM53Q6P2H8 277 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 SPATA12Q7Z6I5 190 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 GKN2Q86XP6 184 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 FAM9BQ8IZU0 186 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CMTM8Q8IZV2 173 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 C17orf78Q8N4C9 275 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CCDC112Q8NEF3 446 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 SGMS2Q8NHU3 365 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 DTD1Q8TEA8 209 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF418Q8TF45 676 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 OR5P2Q8WZ92 322 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TFGQ92734 400 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 MCUR1Q96AQ8 359 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TESCQ96BS2 214 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TPD52L3Q96J77 140 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF396Q96N95 335 aaPredicted RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 BIRC8Q96P09 236 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TSGA13Q96PP4 275 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TSPAN32Q96QS1 320 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 IMMP2LQ96T52 175 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 FAM192AQ9GZU8 254 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CHRNA10Q9GZZ6 450 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 GTSF1LQ9H1H1 148 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 LYRM4Q9HD34 91 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 JPT1Q9UK76 154 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 RRP15Q9Y3B9 282 aaKnown RBP-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 LHFPL6Q9Y693 200 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 STRCQ7RTU9 1775 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 AHCTF1Q8WYP5 2266 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CEP192Q8TEP8 1941 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 NCOR1O75376 2440 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 HMCN2Q8NDA2 5059 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LINC00854A0A1B0GVQ3 168 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 A0A1W2PRF3 423 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 A0A1W2PRM7 423 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 IRGMA1A4Y4 181 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 GOLGA6L10A6NI86 522 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LRRIQ4A6NIV6 560 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CENPXA8MT69 81 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 C8orf87E5RJ46 101 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 TRAPPC2LH3BP13 241 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 H3BSA7 217 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 K7EIL1 84 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 UBDO15205 165 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ATP8B1O43520 1251 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 SYNGR1O43759 233 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ENSAO43768 121 aaKnown RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 HYPMO75409 117 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 STK16O75716 305 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 PMP2P02689 132 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 SHBGP04278 402 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF25P17030 456 aaPredicted RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 GADD45AP24522 165 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CDK2P24941 298 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 HOXA6P31267 233 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 OPRM1P35372 400 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ACTR1BP42025 376 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 GABRA2P47869 451 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms