RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 ZNF439Q8NDP4 499 aa11.93□□□□□ -0.5
SYNGR1-204ENST00000381535 RAB39BQ96DA2 213 aa11.93□□□□□ -0.5
SYNGR1-204ENST00000381535 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
SYNGR1-204ENST00000381535 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
SYNGR1-204ENST00000381535 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 A0A1W2PPH5 198 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 C17orf98A8MV24 154 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 MPC2O95563 127 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 IGHV4-39P01824 125 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 SLC25A4P12235 298 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 LPAR6P43657 344 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 GNG10P50151 68 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 PDLIM4P50479 330 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 GNB2P62879 340 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 IL15RAQ13261 267 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 LGALSLQ3ZCW2 172 aaPredicted RBP11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 C9orf62Q8N4C0 152 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 C8orf46Q8TAG6 207 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 THAP6Q8TBB0 222 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 RBPMSQ93062 196 aaKnown RBP11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 NARFLQ9H6Q4 476 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 HSPB11Q9Y547 144 aa11.92□□□□□ -0.5
SYNGR1-204ENST00000381535 DOCK11Q5JSL3 2073 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 FXYD6-FXYD2A0A087WZ82 144 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 M0R1X1 148 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 RAB29O14966 203 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 PROP1O75360 226 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 C11orf87Q6NUJ2 197 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 LYG1Q8N1E2 194 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 ZNF525Q8N782 197 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 TCTEX1D2Q8WW35 142 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
SYNGR1-204ENST00000381535 IGHV1-8P0DP01 117 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 VDAC1P21796 283 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 ZNF546Q86UE3 836 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 SPAG16Q8N0X2 631 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 C11orf42Q8N5U0 333 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 FAM212BQ9NTI7 297 aaPredicted RBP11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
SYNGR1-204ENST00000381535 LOC105371242A0A075B767 164 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 LINC00473A8K010 186 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 LIPFP07098 398 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 RPA2P15927 270 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 SSTR2P30874 369 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 LINC00205P59089 165 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 RAB32Q13637 225 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 ESCO2Q56NI9 601 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 C1orf229Q6ZS94 237 aaPredicted RBP11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 LINC00311Q8N616 119 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 S1PR3Q99500 378 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 SPIN2AQ99865 258 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 SPIN2BQ9BPZ2 258 aa11.89□□□□□ -0.51
SYNGR1-204ENST00000381535 A0A087X0M5 115 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 SAA2-SAA4A0A096LPE2 208 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 A0A1B0GX30 115 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 A0A1W2PR64 198 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 C22orf46C9J442 243 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 H0YIZ8 118 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 J3QR06 171 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 L7N2F9 121 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 ARPC5O15511 151 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 RLN2P04090 185 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 SAA2P0DJI9 122 aaPredicted RBP11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 CXCL2P19875 107 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 ATP5J2P56134 94 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 S100A10P60903 97 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 OR2B11Q5JQS5 317 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 THOC7Q6I9Y2 204 aaKnown RBP11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 PRSS54Q6PEW0 395 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
SYNGR1-204ENST00000381535 C8orf31Q8N9H6 132 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms