RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 WDR61Q9GZS3 305 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 GNG3P63215 75 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 Q6P435 159 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF600Q6ZNG1 722 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 MBD3L1Q8WWY6 194 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 HIST1H2BLQ99880 126 aa13.7□□□□□ -0.22
NKX3-1-201ENST00000380871 TNFSF10P50591 281 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 NRN1LQ496H8 165 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 BCL2L2Q92843 193 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 PACRGQ96M98 296 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 ELOVL1Q9BW60 279 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 COL27A1Q8IZC6 1860 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 B4DEV8 164 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 CDIPTO14735 213 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF737O75373 536 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 OR2H2O95918 312 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 DRAM1Q8N682 238 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 LHX4Q969G2 390 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 C14orf144Q96I85 54 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 SMIM7Q9BQ49 75 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 RIMS4Q9H426 269 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 GFOD1Q9NXC2 390 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 GAB2Q9UQC2 676 aa13.69□□□□□ -0.22
NKX3-1-201ENST00000380871 PTBP3O95758 552 aaKnown RBP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 CLDN1O95832 211 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 SLC38A11Q08AI6 406 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 TMEM41BQ5BJD5 291 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 ACSM6Q6P461 480 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 OR51I2Q9H344 312 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 GALR2O43603 387 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 CEACAM6P40199 344 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF826PQ6ZT77 177 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 C16orf82Q7Z2V1 217 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 OR13D1Q8NGV5 346 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 TAF15Q92804 592 aaKnown RBP eCLIP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 TRBV6-6A0A0A6YYG2 114 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 KRASP01116 189 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 SLC25A6P12236 298 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 BMP5P22003 454 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 FABP6P51161 128 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 LINC00205P59089 165 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 TBC1D28Q2M2D7 210 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF808Q8N4W9 903 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 OPA3Q9H6K4 179 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 CLN8Q9UBY8 286 aa13.68□□□□□ -0.22
NKX3-1-201ENST00000380871 GZMHP20718 246 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 G6PCP35575 357 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 HBG1P69891 147 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 HBG2P69892 147 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 SLC25A40Q8TBP6 338 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 LSM10Q969L4 123 aaKnown RBP13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 OBP2BQ9NPH6 170 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF816Q0VGE8 651 aaPredicted RBP13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 PRSS8Q16651 343 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 MRGPRGQ86SM5 289 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 GTF3AQ92664 365 aaKnown RBP13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 PSMG3Q9BT73 122 aaPredicted RBP13.67□□□□□ -0.22
NKX3-1-201ENST00000380871 PPP1CBP62140 327 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 C5orf30Q96GV9 206 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 SLC39A9Q9NUM3 307 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 HEATR1Q9H583 2144 aaKnown RBP13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 ELOA3CA0A087WX78 387 aaPredicted RBP13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 COL10A1Q03692 680 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 P2RY6Q15077 328 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 NCR3LG1Q68D85 454 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 NXPH2O95156 264 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 IL2RGP31785 369 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 RPL30P62888 115 aaKnown RBP13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 FOXF2Q12947 444 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 TMEM242Q9NWH2 141 aa13.66□□□□□ -0.22
NKX3-1-201ENST00000380871 TRBV24-1A0A075B6N3 115 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OR5B21A6NL26 309 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 COX5BP10606 129 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 MEF2BQ02080 365 aaPredicted RBP13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 TFF3Q07654 80 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 SCCPDHQ8NBX0 429 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OR5T1Q8NG75 326 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 LIN7CQ9NUP9 197 aaKnown RBP13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OPN1MWP04001 364 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OPN1MW2P0DN77 364 aa13.65□□□□□ -0.22
NKX3-1-201ENST00000380871 OPN1MW3P0DN78 364 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms