RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RND3P61587 244 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF718Q3SXZ3 478 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 FAM57AQ8TBR7 257 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 FAM210BQ96KR6 192 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
CLCN4-201ENST00000380829 RIMS4Q9H426 269 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-201ENST00000380829 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 TMEM210A6NLX4 147 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 M0R1B8 84 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 IFNA21P01568 189 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 TIMP3P35625 211 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 P2RY1P47900 373 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 KRTCAP3Q53RY4 240 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 PRR18Q8N4B5 295 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
CLCN4-201ENST00000380829 TP53RKQ96S44 253 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 SYT3Q9BQG1 590 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
CLCN4-201ENST00000380829 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 BORCS7-ASMTA0A0B4J1R7 106 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-201ENST00000380829 K7N7A8 449 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 KITLGP21583 273 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 BMP5P22003 454 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 MEX3BQ6ZN04 569 aaKnown RBP12.01□□□□□ -0.49
CLCN4-201ENST00000380829 C11orf53Q8IXP5 236 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 OR10J5Q8NHC4 309 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 UBALD1Q8TB05 177 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 IL1F10Q8WWZ1 152 aa12.01□□□□□ -0.49
CLCN4-201ENST00000380829 MSI2Q96DH6 328 aaKnown RBP12.01□□□□□ -0.49
CLCN4-201ENST00000380829 A0A087WWC5 75 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 MPPED1O15442 326 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 TFF1P04155 84 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
CLCN4-201ENST00000380829 OR4A8P0C604 315 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 GLIPR1P48060 266 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 HLA-DRB3P79483 266 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 MSMPQ1L6U9 139 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 PCSK4Q6UW60 755 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 LRP11Q86VZ4 500 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 GAPTQ8N292 157 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 OR13D1Q8NGV5 346 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 CXXC4Q9H2H0 198 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 MBPP02686 304 aaPredicted RBP12□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF146Q15072 292 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 TIMM23BQ5SRD1 257 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF880Q6PDB4 577 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 TBC1D26Q86UD7 250 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 THNSL2Q86YJ6 484 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 Q8NA96 180 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 TMEM208Q9BTX3 173 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 DUSP13Q9UII6 198 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 SH3BGRL2Q9UJC5 107 aa12□□□□□ -0.49
CLCN4-201ENST00000380829 STRAPQ9Y3F4 350 aaKnown RBP12□□□□□ -0.49
CLCN4-201ENST00000380829 CADP27708 2225 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 C3orf85A0A1B0GTC6 90 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 IFNL4K9M1U5 179 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 DVL1O14640 695 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 SH2D1BO14796 132 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TUSC2O75896 110 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 CEACAM8P31997 349 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-201ENST00000380829 FAM27E3Q08E93 113 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TBR1Q16650 682 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 MBNL2Q5VZF2 373 aaKnown RBP11.99□□□□□ -0.49
CLCN4-201ENST00000380829 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 C18orf12Q96KH6 178 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 SFXN3Q9BWM7 321 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 CCL28Q9NRJ3 127 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TUBD1Q9UJT1 453 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 GOLT1BQ9Y3E0 138 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TNFSF12O43508 249 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 PSPNO60542 156 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 HAND1O96004 215 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TDGF1P3P51864 188 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 C22orf34Q6ZV56 151 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 LGI3Q8N145 548 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TVP23CQ96ET8 276 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 HES4Q9HCC6 221 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 OR1A1Q9P1Q5 309 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
CLCN4-201ENST00000380829 ZZEF1O43149 2961 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 RAB4AP20338 218 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 ICAM4Q14773 271 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 SPSB3Q6PJ21 355 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
CLCN4-201ENST00000380829 ZNF497Q6ZNH5 498 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms