RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MBNL3Q9NUK0 354 aaKnown RBP8□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM250H0YL14 139 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 NPY1RP25929 384 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 EGR4Q05215 589 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 NNATQ16517 81 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 PLCXD3Q63HM9 321 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM215Q68D42 235 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 SDF2Q99470 211 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 VSIRQ9H7M9 311 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 HS3ST2Q9Y278 367 aa8□□□□□ -1.13
PTPRA-204ENST00000380393 TDRD6O60522 2096 aaKnown RBP8□□□□□ -1.13
PTPRA-204ENST00000380393 A0A1B0GWA3 101 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SLC17A3O00476 420 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 PSMB3P49720 205 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 PSG4Q00888 419 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF90Q03938 601 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 MLF2Q15773 248 aaPredicted RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF726P1Q15940 193 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 MFSD12Q6NUT3 480 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 LHX4Q969G2 390 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SPSB4Q96A44 273 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SRSF8Q9BRL6 282 aaKnown RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 TIMM29Q9BSF4 260 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 QTRT1Q9BXR0 403 aaKnown RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF286AQ9HBT8 521 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 B4GALT7Q9UBV7 327 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 B3GALT1Q9Y5Z6 326 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 CRYM-AS1A6NIL9 109 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SNURFLB1AK76 121 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ISLRO14498 428 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SSSCA1O60232 199 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 VENTXO95231 258 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 APOA2P02652 100 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 CMPK1P30085 196 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 IER3P46695 156 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SNU13P55769 128 aaKnown RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 MRPL54Q6P161 138 aaKnown RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 MBD3L1Q8WWY6 194 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 NUS1Q96E22 293 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 GPR82Q96P67 336 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 AICDAQ9GZX7 198 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 LDB3O75112 727 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 LINC00869P0C866 280 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 VDAC1P21796 283 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 TAS2R46P59540 309 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF77Q15935 545 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 C1orf100Q5SVJ3 147 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF324BQ6AW86 544 aaPredicted RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 SLC48A1Q6P1K1 146 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM64Q6YI46 380 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 OR10G6Q8NH81 332 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 NEU4Q8WWR8 484 aaPredicted RBP7.99□□□□□ -1.13
PTPRA-204ENST00000380393 NDFIP1Q9BT67 221 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 ULBP2Q9BZM5 246 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 PELI2Q9HAT8 420 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 MED12LQ86YW9 2145 aa7.99□□□□□ -1.13
PTPRA-204ENST00000380393 TMEM265A0A087WTH1 108 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 LYPD3O95274 346 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 RHOBP62745 196 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ATP5G2Q06055 141 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ALG10Q5BKT4 473 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ABHD17BQ5VST6 288 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF439Q8NDP4 499 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 OR5P3Q8WZ94 311 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 IRF7Q92985 503 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 CYYR1Q96J86 154 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 DECR2Q9NUI1 292 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 CES1P1Q9UKY3 287 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 A0A0G2JLM5 398 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF850A8MQ14 1090 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF878C9JN71 531 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 SCGB2A1O75556 95 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
PTPRA-204ENST00000380393 REG1AP05451 166 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 GNG4P50150 75 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 SRSF6Q13247 344 aaKnown RBP7.98□□□□□ -1.13
PTPRA-204ENST00000380393 DEFB134Q4QY38 66 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 TSPO2Q5TGU0 170 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 TRAT1Q6PIZ9 186 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 CDC20BQ86Y33 519 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 GATSQ8NAP1 163 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 OR8B12Q8NGG6 310 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF721Q8TF20 911 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 AMELYQ99218 206 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 WDR54Q9H977 334 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF391Q9UJN7 358 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 WASP42768 502 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZNF585BQ52M93 769 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ADAMTSL5Q6ZMM2 481 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 SHISA5Q8N114 240 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 LRRC25Q8N386 305 aaPredicted RBP7.98□□□□□ -1.13
PTPRA-204ENST00000380393 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 NGBQ9NPG2 151 aa7.98□□□□□ -1.13
PTPRA-204ENST00000380393 MDFIC2A0A1B0GVS7 189 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms