RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 WDR73Q6P4I2 378 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 METTL1Q9UBP6 276 aaKnown RBP16.82■□□□□ 0.28
PCDH8-202ENST00000377942 CEP250Q9BV73 2442 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 PDE6DO43924 150 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 IGHV1-2P23083 117 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 RPEL1Q2QD12 228 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 OVCH2Q7RTZ1 564 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM252Q8N6L7 170 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 IGHV2OR16-5A0A0B4J2B6 119 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 ABHD12Q8N2K0 398 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 C9orf106Q8NAJ2 232 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 SLC2A8Q9NY64 477 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 ALPK2Q86TB3 2170 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 P2RY4P51582 365 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 PCSK4Q6UW60 755 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 ZNF705AQ6ZN79 300 aaPredicted RBP16.81■□□□□ 0.28
PCDH8-202ENST00000377942 NHLRC2Q8NBF2 726 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 CLEC7AQ9BXN2 247 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 NAT8BQ9UHF3 227 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 NEURL1O76050 574 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 USF1P22415 310 aaPredicted RBP16.81■□□□□ 0.28
PCDH8-202ENST00000377942 PDZD11Q5EBL8 140 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 FGFRL1Q8N441 504 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 STARD4Q96DR4 205 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 TRBV23-1A0A0A0MS06 115 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 GLIPR1P48060 266 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 TM2D1Q9BX74 207 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 SLC31A2O15432 143 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 HYPMO75409 117 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 DEDDO75618 318 aa16.81■□□□□ 0.28
PCDH8-202ENST00000377942 NOL4LQ96MY1 436 aaPredicted RBP16.81■□□□□ 0.28
PCDH8-202ENST00000377942 ADAM11O75078 769 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 B4DEV8 164 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 TPPP2P59282 170 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 ANAPC16Q96DE5 110 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 TOLLIPQ9H0E2 274 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM106BQ9NUM4 274 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 HIGD1AQ9Y241 93 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 LYPD3O95274 346 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 HSPE1P61604 102 aaKnown RBP16.8■□□□□ 0.28
PCDH8-202ENST00000377942 DEPPQ9NTK1 212 aa16.8■□□□□ 0.28
PCDH8-202ENST00000377942 HIST1H1EP10412 219 aaKnown RBP16.8■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM255AQ5JRV8 349 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 FAM90A1Q86YD7 464 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 RNASE6Q93091 150 aaKnown RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 TRAF4Q9BUZ4 470 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 ARF6P62330 175 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 ACP7Q6ZNF0 438 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 SPACA3Q8IXA5 215 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 POC1AQ8NBT0 407 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 OR10G8Q8NGN5 311 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 LSM10Q969L4 123 aaKnown RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 IGSF23A1L1A6 192 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 CEACAM18A8MTB9 384 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 CD300CQ08708 224 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 FAM103A1Q9BTL3 118 aaKnown RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 SMDT1Q9H4I9 107 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 IGHV3-72A0A0B4J1Y9 119 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM218A2RU14 115 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 C19orf67A6NJJ6 358 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 DNM1P46Q6ZS02 220 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 OR4C13Q8NGP0 309 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 CCL19Q99731 98 aa16.79■□□□□ 0.28
PCDH8-202ENST00000377942 FNDC1Q4ZHG4 1894 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 ARHGEF17Q96PE2 2063 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-202ENST00000377942 ASPHD2Q6ICH7 369 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 NRIP2Q9BQI9 281 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 RAXQ9Y2V3 346 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 ID1P41134 155 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 H1FOOQ8IZA3 346 aaPredicted RBP16.78■□□□□ 0.28
PCDH8-202ENST00000377942 MGAMO43451 1857 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
PCDH8-202ENST00000377942 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 SELENOHQ8IZQ5 122 aaKnown RBP16.78■□□□□ 0.28
PCDH8-202ENST00000377942 DYNLRB2Q8TF09 96 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 GPR146Q96CH1 333 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 NCOR1O75376 2440 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 SPTBN2O15020 2390 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 DOCK4Q8N1I0 1966 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 ZNF716A6NP11 495 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 IQCF6A8MYZ5 107 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 OR2A4O95047 310 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 ATP5IP56385 69 aaPredicted RBP16.78■□□□□ 0.28
PCDH8-202ENST00000377942 C1QTNF12Q5T7M4 302 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 RGP1Q92546 391 aaPredicted RBP16.78■□□□□ 0.28
PCDH8-202ENST00000377942 OR2A7Q96R45 310 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM204Q9BSN7 226 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 TMEM140Q9NV12 185 aa16.78■□□□□ 0.28
PCDH8-202ENST00000377942 TM4SF5O14894 197 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 C16orf82Q7Z2V1 217 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 FAM222BQ8WU58 562 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 FAM210BQ96KR6 192 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 FAM157CP0CG43 387 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 APELAP0DMC3 54 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 P2RX4Q99571 388 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 NIT2Q9NQR4 276 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 SDK2Q58EX2 2172 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 SCO1O75880 301 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 DCAF12L2Q5VW00 463 aa16.77■□□□□ 0.28
PCDH8-202ENST00000377942 THADAQ6YHU6 1953 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms