RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 R4GN57 208 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 FXYD1O00168 92 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 CA11O75493 328 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 CDS2O95674 445 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 BCL2P10415 239 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 A0A1B0GTL3 188 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 FFAR1O14842 300 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 RCC2Q9P258 522 aaKnown RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 LAMTOR1Q6IAA8 161 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 INO80CQ6PI98 192 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 A0A1B0GTH9 108 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 OR2V2Q96R30 315 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 RASL10BQ96S79 203 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 F11RQ9Y624 299 aaKnown RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 PRSS2P07478 247 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 RHBDD2Q6NTF9 364 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 ZCCHC14Q8WYQ9 949 aaKnown RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 SCNM1Q9BWG6 230 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 H1FOOQ8IZA3 346 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-204ENST00000376634 FAM206AQ9NX38 181 aa10.89□□□□□ -0.67
VPS13A-204ENST00000376634 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 MYO18BQ8IUG5 2567 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 IGKV3D-11A0A0A0MRZ8 115 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 C7orf77A4D0Y5 90 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 CGB1A6NKQ9 187 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 IGKV3-11P04433 115 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 NPBWR2P48146 333 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 COL10A1Q03692 680 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ADAP1O75689 374 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 COX6B1P14854 86 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF345Q14585 488 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 LEMD1Q68G75 181 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 THSD4Q6ZMP0 1018 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 PTPRQQ9UMZ3 2332 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 IGKV3D-15A0A087WSY6 115 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 IGKV3-15P01624 115 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
VPS13A-204ENST00000376634 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ADAD2Q8NCV1 583 aaKnown RBP10.88□□□□□ -0.67
VPS13A-204ENST00000376634 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ABHD1Q96SE0 405 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 TSPOP30536 169 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 GFRA1P56159 465 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 TNFSF10P50591 281 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 C16orf47Q6ZP98 133 aaPredicted RBP10.88□□□□□ -0.67
VPS13A-204ENST00000376634 PGLYRP3Q96LB9 341 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 SMDT1Q9H4I9 107 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 OBSL1O75147 1896 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 HBZP02008 142 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ALKBH7Q9BT30 221 aaPredicted RBP10.88□□□□□ -0.67
VPS13A-204ENST00000376634 IL36RNQ9UBH0 155 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 CTDSPLO15194 276 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 MYEOVQ96EZ4 313 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 ALG14Q96F25 216 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 SERGEFQ9UGK8 458 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 TFPI2P48307 235 aa10.88□□□□□ -0.67
VPS13A-204ENST00000376634 DSPPQ9NZW4 1301 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 LNP1A1A4G5 178 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 PSG6Q00889 435 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 C2orf83Q53S99 150 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 FSCN3Q9NQT6 498 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 OR2A4O95047 310 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 MT-ND6P03923 174 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 PLPPR5Q32ZL2 321 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 OR2A7Q96R45 310 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-204ENST00000376634 AMY1AP04745 511 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 IL4P05112 153 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 IGHV4-34P06331 123 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 EWSR1Q01844 656 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS13A-204ENST00000376634 LINC01555Q8NAE3 123 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 RGP1Q92546 391 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-204ENST00000376634 TMEM30AQ9NV96 361 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 HILPDAQ9Y5L2 63 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 HLA-DQA1P01909 254 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 PRSS12P56730 875 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 PSG9Q00887 426 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 GGTLC2Q14390 218 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 ZG16BQ96DA0 208 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 J3QT63 122 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 SOCS1O15524 211 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
VPS13A-204ENST00000376634 TMEM177Q53S58 311 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 AQP10Q96PS8 301 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 IGF2P01344 180 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms