RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
MSH5-202ENST00000375740 TMEM171Q8WVE6 324 aa11.77□□□□□ -0.53
MSH5-202ENST00000375740 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
MSH5-202ENST00000375740 OR4A8P0C604 315 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 MMP9P14780 707 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 F2RP25116 425 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
MSH5-202ENST00000375740 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
MSH5-202ENST00000375740 RUNX1Q01196 453 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 EWSR1Q01844 656 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSH5-202ENST00000375740 RTP5Q14D33 572 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 OR4X1Q8NH49 305 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 GTF3C1Q12789 2109 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 H0Y980 276 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 WNT9BO14905 357 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 CD55P08174 381 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 NMSQ5H8A3 153 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 OR10V1Q8NGI7 309 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 SPIN2AQ99865 258 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 SPIN2BQ9BPZ2 258 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 MAGT1Q9H0U3 335 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 CBLN4Q9NTU7 201 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 ASPMQ8IZT6 3477 aa11.76□□□□□ -0.53
MSH5-202ENST00000375740 IGHV1-18A0A0C4DH31 117 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 DVL1O14640 695 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 TIMM8AO60220 97 aaPredicted RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 HAND1O96004 215 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 IGLV1-44P01699 117 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 EPHA1P21709 976 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 VDAC1P21796 283 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 TESK1Q15569 626 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 SP5Q6BEB4 398 aaPredicted RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 Q6ZR03 302 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 MOB1BQ7L9L4 216 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 BHLHA15Q7RTS1 189 aaPredicted RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 HES4Q9HCC6 221 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 KIAA1456Q9P272 454 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 INTS1Q8N201 2190 aaKnown RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 S100GP29377 79 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 OR2C3Q8N628 320 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 RCC1LQ96I51 464 aaKnown RBP11.75□□□□□ -0.53
MSH5-202ENST00000375740 MSL2Q9HCI7 577 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 PITPNC1Q9UKF7 332 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
MSH5-202ENST00000375740 CLEC18AA5D8T8 446 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBD3L4A6NDZ8 208 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBD3L3A6NE82 208 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBD3L5A6NJ08 208 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 HSPA12AO43301 675 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 PSPNO60542 156 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 KITLGP21583 273 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 COL10A1Q03692 680 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 P2RY6Q15077 328 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 ZNF718Q3SXZ3 478 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 WDR25Q64LD2 544 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 C1orf87Q8N0U7 546 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 CLEC18CQ8NCF0 446 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBD3L2Q8NHZ7 208 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBNL3Q9NUK0 354 aaKnown RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 A6NNC1 897 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 PROB1E7EW31 1015 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 SSSCA1O60232 199 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 MBP02144 154 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 PCP4P48539 62 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 ID3Q02535 119 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 IL22RA2Q969J5 263 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 ACTR3CQ9C0K3 210 aaPredicted RBP11.74□□□□□ -0.53
MSH5-202ENST00000375740 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
MSH5-202ENST00000375740 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 K7EM74 188 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 NXPH3O95157 252 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 NPSP0C0P6 89 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 PSG2P11465 335 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 TUBG1P23258 451 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 GCH1P30793 250 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 RAB11AP62491 216 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 PRSS8Q16651 343 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 Q6ZS92 163 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms