RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PCNX1Q96RV3 2341 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 DOCK9Q9BZ29 2069 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 HOXA5P20719 270 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 TNFRSF9Q07011 255 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 DEFB109BQ30KR1 87 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 Q6ZN92 141 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 SMIM15Q7Z3B0 74 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 DNASE2BQ8WZ79 361 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 ADTRPQ96IZ2 230 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 PARLQ9H300 379 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 IL17BQ9UHF5 180 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 SRSF10O75494 262 aaKnown RBP14.41□□□□□ -0.1
VARS-215ENST00000375663 COX6A1P12074 109 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 CCL1P22362 96 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 TEPPQ6URK8 271 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 NFAM1Q8NET5 270 aaPredicted RBP14.41□□□□□ -0.1
VARS-215ENST00000375663 HIF1ANQ9NWT6 349 aa14.41□□□□□ -0.1
VARS-215ENST00000375663 FAM90A26D6RGX4 464 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 SYNGR3O43761 229 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 SLC25A5P05141 298 aaKnown RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 COX19Q49B96 90 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 OR1L1Q8NH94 360 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 MAFAQ8NHW3 353 aaPredicted RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 KIAA2026Q5HYC2 2103 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 M0QZK8 103 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 GGCTO75223 188 aaKnown RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 KBTBD11O94819 623 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 SRP14P37108 136 aaKnown RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 LSM10Q969L4 123 aaKnown RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 TTTY12Q9BZ98 90 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 FANCMQ8IYD8 2048 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 PRR19A6NJB7 356 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 AGFG2O95081 481 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 IGLV3-19P01714 112 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 CSN1S1P47710 185 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 DCAF10Q5QP82 559 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 STARD4Q96DR4 205 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 LYZL4Q96KX0 146 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 PSMG3Q9BT73 122 aaPredicted RBP14.4□□□□□ -0.1
VARS-215ENST00000375663 ZNF355PQ9NSJ1 428 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
VARS-215ENST00000375663 TOX4O94842 621 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 S100A7P31151 101 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 VMA21Q3ZAQ7 101 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 SLC25A53Q5H9E4 307 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 ZNF441Q8N8Z8 693 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 Q8WTZ3 238 aa14.4□□□□□ -0.11
VARS-215ENST00000375663 SERTM2A0A1B0GWG4 89 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 LRRC3CA6NJW4 275 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 KLF3P57682 345 aaPredicted RBP14.39□□□□□ -0.11
VARS-215ENST00000375663 TMEM251Q8N6I4 163 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 PKIBQ9C010 78 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 DOCK7Q96N67 2140 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 TNFRSF1AP19438 455 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 RBPJQ06330 500 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 WDR61Q9GZS3 305 aaKnown RBP14.39□□□□□ -0.11
VARS-215ENST00000375663 SRD5A3Q9H8P0 318 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 PLSCR2Q9NRY7 297 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 PXMP4Q9Y6I8 212 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 DIDO1Q9BTC0 2240 aaKnown RBP14.39□□□□□ -0.11
VARS-215ENST00000375663 RTN4RL2Q86UN3 420 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 BLNKQ8WV28 456 aa14.39□□□□□ -0.11
VARS-215ENST00000375663 ZNF552Q9H707 407 aaPredicted RBP14.39□□□□□ -0.11
VARS-215ENST00000375663 TRAV38-1A0A0B4J264 116 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 ZNF729A6NN14 1252 aaPredicted RBP14.38□□□□□ -0.11
VARS-215ENST00000375663 PRRG2O14669 202 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 ZG16O60844 167 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 CHRNB4P30926 498 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 SOX8P57073 446 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 SRSF4Q08170 494 aaKnown RBP14.38□□□□□ -0.11
VARS-215ENST00000375663 DMWDQ09019 674 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 ZNF826PQ6ZT77 177 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 RNF144BQ7Z419 303 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 NPVFQ9HCQ7 196 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 TMEM250H0YL14 139 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 ZIC3O60481 467 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 AGAP20933 346 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 UBE2CO00762 179 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 USF1P22415 310 aaPredicted RBP14.38□□□□□ -0.11
VARS-215ENST00000375663 DRAM1Q8N682 238 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 HSPB9Q9BQS6 159 aa14.38□□□□□ -0.11
VARS-215ENST00000375663 MPDU1O75352 247 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 ZNF645Q8N7E2 425 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 OR4C5Q8NGB2 326 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 SAP25Q8TEE9 199 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 GLRX2Q9NS18 164 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 A0A087WWC5 75 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 A0A1B0GV90 55 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 K7N7A8 449 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 EFNA2O43921 213 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 TMEM11P17152 192 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 CEBPDP49716 269 aaPredicted RBP14.37□□□□□ -0.11
VARS-215ENST00000375663 TNFAIP6P98066 277 aaPredicted RBP14.37□□□□□ -0.11
VARS-215ENST00000375663 GABRA6Q16445 453 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 INO80CQ6PI98 192 aaPredicted RBP14.37□□□□□ -0.11
VARS-215ENST00000375663 WFIKKN1Q96NZ8 548 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 NAGKQ9UJ70 344 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 PKDREJQ9NTG1 2253 aa14.37□□□□□ -0.11
VARS-215ENST00000375663 hADV38S2A0JD32 116 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms