RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 C12orf45Q8N5I9 185 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CCDC71LQ8N9Z2 235 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR52B4Q8NGK2 314 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR52M1Q8NGK5 317 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TMEM230Q96A57 120 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 AKR1E2Q96JD6 320 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF714Q96N38 554 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 YPEL2Q96QA6 119 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NEURL2Q9BR09 285 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CCL28Q9NRJ3 127 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GNG12Q9UBI6 72 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 KCNIP3Q9Y2W7 256 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SOX21Q9Y651 276 aaPredicted RBP8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 AUP1Q9Y679 476 aa8.93□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PPIAL4CA0A0B4J2A2 164 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 A0A1W2PPH5 198 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CRYM-AS1A6NIL9 109 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 F5H0A9 414 aaPredicted RBP8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 HSD17B6O14756 317 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CCNKO75909 580 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SLC22A5O76082 557 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 DUS4LO95620 317 aaKnown RBP8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 HLA-AP01891 365 aaKnown RBP8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR8U9P0C7N5 309 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MDKP21741 143 aaPredicted RBP8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OMGP23515 440 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 VAMP1P23763 118 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PPP1CCP36873 323 aaKnown RBP8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LOXL3P58215 753 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RND3P61587 244 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GNB2P62879 340 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF273Q14593 569 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GNMTQ14749 295 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FCN2Q15485 313 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SLC9A3R2Q15599 337 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C11orf91Q3C1V1 193 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LY6G6FQ5SQ64 297 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF818PQ6ZRF7 136 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TCF23Q7RTU1 214 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CMTM1Q8IZ96 169 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 UXS1Q8NBZ7 420 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR8U1Q8NH10 309 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 EDARADDQ8WWZ3 215 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PPP1R14BQ96C90 147 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PHB2Q99623 299 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GFOD1Q9NXC2 390 aa8.92□□□□□ -0.98
HLA-DQA1-202ENST00000374949 A0A0B4J2A0 478 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MDFIC2A0A1B0GVS7 189 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ITGB1BP1O14713 200 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MPPED1O15442 326 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SULT1A3P0DMM9 295 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SULT1A4P0DMN0 295 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PPIAL4GP0DN37 164 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 IGHV4-38-2P0DP08 117 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ANXA3P12429 323 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NFYBP25208 207 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CD34P28906 385 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 DLX6P56179 175 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SRSF4Q08170 494 aaKnown RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 HEPN1Q6WQI6 88 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 KCTD9Q7L273 389 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LDLRAD3Q86YD5 345 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZBTB34Q8NCN2 500 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 BVESQ8NE79 360 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 COQ8AQ8NI60 647 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C8orf46Q8TAG6 207 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CASTOR1Q8WTX7 329 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MITD1Q8WV92 249 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MS4A7Q9GZW8 240 aaPredicted RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PARP12Q9H0J9 701 aaKnown RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NAA60Q9H7X0 242 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SLC2A9Q9NRM0 540 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SHPKQ9UHJ6 478 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RPUSD1Q9UJJ7 312 aaKnown RBP8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 INSIG2Q9Y5U4 225 aa8.91□□□□□ -0.98
HLA-DQA1-202ENST00000374949 A8MXK9 166 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CLDN34H7C241 214 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PGLYRP1O75594 196 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CCL3L1P16619 93 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RAB7AP51149 207 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 MSMO1Q15800 293 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ESCO2Q56NI9 601 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PRAMEF5Q5TYX0 476 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FAM53AQ6NSI3 398 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TBC1D26Q86UD7 250 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF645Q8N7E2 425 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 LY6G5BQ8NDX9 201 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GALNT14Q96FL9 552 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PSG11Q9UQ72 335 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GAB2Q9UQC2 676 aa8.9□□□□□ -0.98
HLA-DQA1-202ENST00000374949 TRAV40A0A0B4J280 105 aa8.89□□□□□ -0.99
HLA-DQA1-202ENST00000374949 C3orf85A0A1B0GTC6 90 aa8.89□□□□□ -0.99
HLA-DQA1-202ENST00000374949 hCG_1809904A0A1W2PP81 198 aa8.89□□□□□ -0.99
HLA-DQA1-202ENST00000374949 A0A1W2PPE2 198 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms