RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PRB4P10163 310 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 VDAC1P21796 283 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 CEBPDP49716 269 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 CNN1P51911 297 aaKnown RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF816Q0VGE8 651 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SHHQ15465 462 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 HLA-DRB5Q30154 266 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SPATA46Q5T0L3 261 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 H1FOOQ8IZA3 346 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF808Q8N4W9 903 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 OR5D13Q8NGL4 314 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 RNASEH2CQ8TDP1 164 aaKnown RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM170AQ8WVE7 144 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 OR5B12Q96R08 314 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 HSPB9Q9BQS6 159 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SSBP4Q9BWG4 385 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 OR51I2Q9H344 312 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 FOXJ2Q9P0K8 574 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 NAT8Q9UHE5 227 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 MRPS18CQ9Y3D5 142 aaKnown RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 RBM7Q9Y580 266 aaKnown RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 TRAPPC1Q9Y5R8 145 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 MTCH2Q9Y6C9 303 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 IGHV1OR21-1A0A087WYE8 117 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 A0A1W2PPC4 97 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 M0QZK8 103 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 DLL1O00548 723 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SYNGR3O43761 229 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 ZIC3O60481 467 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 RHBDL1O75783 438 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SERF1AO75920 110 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 RPLP1P05386 114 aaKnown RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 CRYGSP22914 178 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 DTYMKP23919 212 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 BRS3P32247 399 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 G6PCP35575 357 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 HYAL1Q12794 435 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 TRIM61Q5EBN2 209 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 C1orf194Q5T5A4 169 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 PCSK4Q6UW60 755 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 SYT13Q7L8C5 426 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 C11orf42Q8N5U0 333 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 STPG4Q8N801 248 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 BEND2Q8NDZ0 799 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 C22orf15Q8WYQ4 148 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 MRGPRX4Q96LA9 322 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 CLUHP3Q96NS8 147 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 OR6C1Q96RD1 312 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 AGMATQ9BSE5 352 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 WNT10AQ9GZT5 417 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF552Q9H707 407 aaPredicted RBP4.58□□□□□ -1.68
ATG4A-204ENST00000372246 DNAJC4Q9NNZ3 241 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 DEPPQ9NTK1 212 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 OR6C3Q9NZP0 311 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 RNF24Q9Y225 148 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 HS3ST3A1Q9Y663 406 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 TACC2O95359 2948 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 USF3Q68DE3 2245 aa4.58□□□□□ -1.68
ATG4A-204ENST00000372246 B4DEV8 164 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SYNGR2O43760 224 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 KBTBD11O94819 623 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 HRASP01112 189 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 PDGFBP01127 241 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 GCGP01275 180 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 GHRHP01286 108 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 HBE1P02100 147 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 WNT2P09544 360 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 RFPL3SP0C7P2 107 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 F2RP25116 425 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 UCP1P25874 307 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 CEACAM8P31997 349 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OTX1P32242 354 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 ECI1P42126 302 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 FASLGP48023 281 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 PRRX1P54821 245 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 KRTDAPP60985 99 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 GNB1P62873 340 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 CEACAM16Q2WEN9 425 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF585BQ52M93 769 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 FFAR4Q5NUL3 377 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 DCAF10Q5QP82 559 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 CYP2G1PQ6ZSU1 146 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 LHFPL4Q7Z7J7 247 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SAXO1Q8IYX7 474 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF709Q8N972 641 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR5L2Q8NGL0 311 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR1L6Q8NGR2 347 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SGMS2Q8NHU3 365 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 ABHD3Q8WU67 409 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 WFDC12Q8WWY7 111 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TAF15Q92804 592 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SPTSSAQ969W0 71 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 WDR61Q9GZS3 305 aaKnown RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TUBG2Q9NRH3 451 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TM4SF5O14894 197 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 ZG16O60844 167 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TCL1AP56279 114 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms